Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 172 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N1B4

 Score = 63.5 bits (153), Expect = 2e-15
 Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 6/161 (3%)

Query: 18  FVDNRSILVKIAARITGCRSRAEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIVRNLAID 77
           F+  R  L++   R+    S AED++Q+ + R++ A    +    +  ++FQ  RNLA+D
Sbjct: 10  FIAQRVSLLRTLERMVNNHSTAEDLLQETYLRVTRALSERAIDHLE-PFVFQTARNLALD 68

Query: 78  HYRKQAMELKYSGSEEEGMNVVVQNASPEATHINRAALNDIAEALN----ELPPRTRYAF 133
           H R + ++ + +  ++  ++VV   ASP ++  + A    + E LN    EL PR +  F
Sbjct: 69  HLRARRIQSR-TMLDDVPLDVVQSVASPVSSAEDAAHAEQLLERLNVSLSELSPRQQQIF 127

Query: 134 EMYRLNGVPQKDIAKELGVSPTLVNFMIRDALVHCRKTASR 174
            + RL+G    +IA++LGVS + V   ++  +  C   A R
Sbjct: 128 ILSRLHGHSYLEIAEKLGVSLSTVQKELKLIMAICIGIAQR 168