Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 159 a.a., RNA polymerase sigma factor FECI protein from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 5e-22
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 3/153 (1%)

Query: 18  FVDNRSILVKIAARITGCRSRAEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIVRNLAID 77
           ++ +R  L+  AA + G +  AED+VQDA+ R     +         +YLF+IVRNL+ +
Sbjct: 2   YLRHRRSLIDYAAPLLGSKDDAEDIVQDAYLRF--VRETADEHMPPKTYLFRIVRNLSFN 59

Query: 78  HYRKQAMELKYSGSEEEGMNVVVQNA-SPEATHINRAALNDIAEALNELPPRTRYAFEMY 136
              ++ +E     S +     + Q   +PEA  +   A + +A+AL  LP R R AFE+Y
Sbjct: 60  KRSRRKLENNVVESADIPWWALPQAVETPEAQFLMSEAADRVAQALGALPDRMRRAFELY 119

Query: 137 RLNGVPQKDIAKELGVSPTLVNFMIRDALVHCR 169
           R  G   KDIA+EL +S    + ++RDA+ H +
Sbjct: 120 RFEGSTLKDIAEELSISIPTAHRLVRDAMEHLK 152