Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.4 bits (233), Expect = 1e-24
 Identities = 60/163 (36%), Positives = 88/163 (53%), Gaps = 10/163 (6%)

Query: 15  LQAFVDNRSILVKIAARITGCRSRAEDVVQDAFFRLSTAPQITSSFKA--------QLSY 66
           L  F+ +R  L+  A  I G   RAEDVVQ+A+ R  +A    +S +A         + Y
Sbjct: 8   LDLFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGY 67

Query: 67  LFQIVRNLAIDHYRKQAMELKYSGSEEEGMNVVVQNA-SPEATHINRAALNDIAEALNEL 125
           L++IVRNLA+D  R+   E  + G     ++ V   A SPE   I R  L  +A+AL  L
Sbjct: 68  LYKIVRNLAVDLSRRLKREA-WMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASL 126

Query: 126 PPRTRYAFEMYRLNGVPQKDIAKELGVSPTLVNFMIRDALVHC 168
           PPRTR AF+++R       +I + LG+S T  + ++ +AL HC
Sbjct: 127 PPRTRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHC 169