Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 214 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 63.5 bits (153), Expect = 2e-15
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 5/156 (3%)

Query: 22  RSILVKIAARITGCRSRAEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIVRNLAIDHYRK 81
           RS+L K+  RI   R  AED+ Q+ + R+  A + +       ++L +  RNLA+DH R+
Sbjct: 48  RSLLGKLT-RIVQDRQIAEDLTQETYLRVRRAAE-SGPIDHIEAFLHRTARNLALDHLRR 105

Query: 82  QAMELKYSGSE-EEGM--NVVVQNASPEATHINRAALNDIAEALNELPPRTRYAFEMYRL 138
                    S  E+G   ++     S E   I R  L  ++EA+  LP R R    + R+
Sbjct: 106 TKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVLTLSRV 165

Query: 139 NGVPQKDIAKELGVSPTLVNFMIRDALVHCRKTASR 174
              P   IA  LG+S   V   ++ AL HCR   +R
Sbjct: 166 EDWPNTKIAAHLGISERTVFNDLKLALGHCRDAMAR 201