Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 60.5 bits (145), Expect = 1e-14
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 4/138 (2%)

Query: 31  RITGCRSRAEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIVRNLAIDHYRKQAMELKYSG 90
           R  GC  +A D+ QD F RL    + ++      + L  I + L +DH+R++A+E  Y  
Sbjct: 26  RQLGCSHQAADLAQDTFLRL--LGRRSADLGEPRALLTHIAKGLVVDHWRRRAVEQAYL- 82

Query: 91  SEEEGMNVVVQNASPEATHINRAALNDIAEALNELPPRTRYAFEMYRLNGVPQKDIAKEL 150
            E        Q  SPE   +   AL  +   L  LPPRTR  F + +L+G+    IA+ L
Sbjct: 83  -EVLARLPEAQAPSPETRLLVLEALCRVDAMLAGLPPRTREIFLLSQLDGLTYGAIAERL 141

Query: 151 GVSPTLVNFMIRDALVHC 168
           G S   V   +R+  + C
Sbjct: 142 GTSLITVKRHMRNGFIAC 159