Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 68.2 bits (165), Expect = 7e-17
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 1/140 (0%)

Query: 30  ARITGCRSRAEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIVRNLAIDHYRKQAMELKYS 89
           A+   CR  A ++ Q+ F R+  +     + +   ++L++I  NLA+DHYR +A   +  
Sbjct: 23  AQRVACREVARELAQETFLRMMLSDG-KDAIRNPRAFLYRIAANLAVDHYRAEAGRPREI 81

Query: 90  GSEEEGMNVVVQNASPEATHINRAALNDIAEALNELPPRTRYAFEMYRLNGVPQKDIAKE 149
              E+          PE     R  L  +A A+ +LPPR R  F  ++ +G  Q D+A+E
Sbjct: 82  LPLEDCAEQACPRPGPEQVASARQTLARLAAAVEQLPPRCREVFLRHKFDGCRQADLARE 141

Query: 150 LGVSPTLVNFMIRDALVHCR 169
            G+S   +   +  ALV  R
Sbjct: 142 YGISVNAIEKHLIRALVQLR 161