Pairwise Alignments

Query, 403 a.a., Cytochrome c family protein from Pseudomonas putida KT2440

Subject, 521 a.a., cytochrome c oxidase, subunit II (RefSeq) from Shewanella loihica PV-4

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 15/128 (11%)

Query: 265 ADLAAMATYLLGDQPPPAKAIESVALEQMSDSAKRGHQQYLNVCAGCHGVDGEGKPHIAV 324
           AD +A A+    D  P A  ++ + ++++     +G Q YL  CA CH   G G P    
Sbjct: 398 ADSSAAASSTAED--PQAPVLDDLTMDELM---AKGEQVYLGHCAACHQATGMGLPGAFP 452

Query: 325 AMRGNTVLRQADSRNLVKVVLEGIREQQFTGFERMQPMPGFADKLDDQQVIDMVNYLRQA 384
           A++G+ +      +N + +VL G         +    M  FA +L  Q++  ++ + R A
Sbjct: 453 ALKGSAI-ATGPVKNHLDIVLHG---------KPGTAMQAFASQLTPQEIASVITFERNA 502

Query: 385 WGGLPGDL 392
           WG   GD+
Sbjct: 503 WGNNTGDM 510



 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 299 RGHQQYLNVCAGCHGVDGEGKPHIAVAMRGNTVLRQADSRNLVKVVLEGIREQQFTGFER 358
           +G Q Y+  CA CH  +G G P +  ++ G+ +++   + +L  VVL G           
Sbjct: 279 QGEQVYMARCAACHQPNGAGLPGVFPSLIGSPIIKGPVADHL-DVVLHG---------RS 328

Query: 359 MQPMPGFADKLDDQQVIDMVNYLRQAWGGLPGD 391
              M  FA +L   ++  +V + R AWG   GD
Sbjct: 329 GTAMQAFAQQLTATEIAAVVTFERNAWGNDTGD 361