Pairwise Alignments

Query, 403 a.a., Cytochrome c family protein from Pseudomonas putida KT2440

Subject, 513 a.a., cytochrome c oxidase, subunit II (RefSeq) from Shewanella sp. ANA-3

 Score = 51.6 bits (122), Expect = 5e-11
 Identities = 54/228 (23%), Positives = 85/228 (37%), Gaps = 30/228 (13%)

Query: 183 LGHCGECHTPRNPIGALQQDQRLSG-----GLLGGYLAPSL-----LAQDLAERGWTQPD 232
           LGHC  CH P N  G       L G     G L G+L   L      A     +  T  +
Sbjct: 285 LGHCAACHQP-NGEGLQGVFPHLKGSPIATGPLSGHLEIVLNGKAGTAMQAFGKQLTTQE 343

Query: 233 LTTFLKHGISAQGSMFNEMFP---VVHHSTQHLEDADLAAMATYLLGDQPP----PAKAI 285
           +   + +  +A G+   +      V  H +       +A        D P     P  ++
Sbjct: 344 IAAVITYERNAWGNNTGDAVQAKDVDAHKSGGTSSEPVATTPPPATTDAPKTATEPTASV 403

Query: 286 ESVALEQMS--DSAKRGHQQYLNVCAGCHGVDGEGKPHIAVAMRGNTVLRQADSRNLVKV 343
           +  +L  +S  +    G + Y  +CA CH + G G P    A+ G+ +       N + +
Sbjct: 404 DPASLPTLSHDELMAEGEKTYATICAACHQLTGAGMPPAFPALAGSAI-ATGPIANHIDI 462

Query: 344 VLEGIREQQFTGFERMQPMPGFADKLDDQQVIDMVNYLRQAWGGLPGD 391
           V+ G         +    M  F  +L  QQ+  ++ Y R AWG   GD
Sbjct: 463 VMHG---------KPGTAMQAFGTQLTPQQLAAIITYERNAWGNNTGD 501



 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 299 RGHQQYLNVCAGCHGVDGEGKPHIAVAMRGNTVLRQADSRNLVKVVLEGIREQQFTGFER 358
           +G Q YL  CA CH  +GEG   +   ++G+ +     S +L ++VL G         + 
Sbjct: 279 QGEQVYLGHCAACHQPNGEGLQGVFPHLKGSPIATGPLSGHL-EIVLNG---------KA 328

Query: 359 MQPMPGFADKLDDQQVIDMVNYLRQAWGGLPGD 391
              M  F  +L  Q++  ++ Y R AWG   GD
Sbjct: 329 GTAMQAFGKQLTTQEIAAVITYERNAWGNNTGD 361