Pairwise Alignments

Query, 552 a.a., pyoverdine ABC export system, fused ATPase and permease components from Pseudomonas putida KT2440

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 2e-29
 Identities = 129/559 (23%), Positives = 244/559 (43%), Gaps = 48/559 (8%)

Query: 23  VTVSIILGMVGGLSVTALLATINSALHSDTGLTQGVVLGFAGLCLLALF-----SSICSD 77
           + VS I  ++   + T +++ +   L    G  +   L      +L L      S   S 
Sbjct: 27  LVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASS 86

Query: 78  MGTNWVGQHIIARLRRELGEKVLAAPIDQIERYRSHRLIPVLTHDVDTISDFAF-VFAPL 136
              +WV  +++ ++RR L    +  P+   ++  +  L+  +T+D + ++         +
Sbjct: 87  YCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSI 146

Query: 137 AVSLTVTVGCLGYLAHLSIPMFLV-ILVAIGIGSVMQFVARSWGV--RGFESAR-----E 188
                  +G L  +   S  + LV I+VA  +   + FV++ +    R  ++A       
Sbjct: 147 VREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSS 206

Query: 189 AEDELQKHYSAIAEGAKELRIHRPRRKRMFQHGIQDTANRICATQVRSINTFVIAKTLGS 248
           AE  L+ H   ++ G +E  + R R  ++     Q T   + A  +       + + + S
Sbjct: 207 AEQMLKGHKVVLSYGGQE--VERKRFDKVSNSMRQQTMKLVSAQSIAD----PVIQMIAS 260

Query: 249 MLFFVVIAVALAMQSLWPTGDKSVTSG-FVLVLLYMKGPLEHLISTLPIISKAQIAFRRI 307
           +  F V+ +A ++ S+       +T G F +V   M G +  L +   + S+ Q   R +
Sbjct: 261 LALFAVLFLA-SVDSI----RAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQ---RGM 312

Query: 308 AELSRQFSSPEPHLLLDDTR-AADKALHTLQLQDVSYTFPRVEGSEPFHLGPVNLSIKQG 366
           A     F   +     D+ +  A++    + ++DV++T+   +G E   L  V+ SI QG
Sbjct: 313 AACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTY---QGKEKPALSHVSFSIPQG 369

Query: 367 DIVFIVGENGCGKTTLIKLLLGLYAPQQGTISLDGKPVTAENRDDYRQLFTTIFADYYLF 426
             V +VG +G GK+T+  L    Y    G+I LDG  V      + R+ F  +  + +LF
Sbjct: 370 KTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLF 429

Query: 427 DDVIQGDRPVPADASRYLERLE----IAHKVSIRDGV---------FSTTDLSTGQRKRL 473
           +D I  +    A+     E++E     AH +   + +          + T LS GQR+R+
Sbjct: 430 NDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRV 489

Query: 474 ALVSAWLEERPVLVFDEWAADQDPTFRRIFYTELLPDLKRLGKTIIVISHDDRYFDVADQ 533
           A+  A L + PVL+ DE  +  D    R     L  D  +  KT++VI+H     + AD+
Sbjct: 490 AIARALLRDAPVLILDEATSALDTESERAIQAAL--DELQKNKTVLVIAHRLSTIEQADE 547

Query: 534 LIHMAAGKVQQENRVADCI 552
           ++ +  G++ +  R AD +
Sbjct: 548 ILVVDEGEIIERGRHADLL 566