Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 413 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 93/354 (26%), Positives = 150/354 (42%), Gaps = 37/354 (10%)

Query: 33  GAQPVSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQIRNLHVEVGDQVHKGQLLVE 92
           G  PV    V + + E    ALG++ P   V++ ++  G++  L  E G +V KG LL  
Sbjct: 54  GPVPVRVAKVEQGEFEVFNKALGSVTPLNTVNLRSRVGGELVELRFEEGQRVKKGDLLAV 113

Query: 93  IDPSTQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEA 152
           IDP          + ++   +  L + RAQLK AQ   +R R L A  +  ++ L T EA
Sbjct: 114 IDPRPY-------KVALQQAEGTLQQNRAQLKNAQVDFERYRGLFADDSIAKQTLDTQEA 166

Query: 153 QLNVTQARIDMYQAQIRQANASLRSDEAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQT 212
            ++  Q  +   QA + +A  +L        +T+I +P+DG V       G  + A   T
Sbjct: 167 LVSQYQGTLAANQASVNEARLNLE-------FTQIRSPIDGRVGLRQLDVGNLVAANDTT 219

Query: 213 PLILRIAKLSPMTVWAQVSEADIGKIQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPL- 271
           PL++ I +  PM++   + E D   + P +T Y        R+      Q+     K + 
Sbjct: 220 PLVV-ITQTQPMSISFTLPEGD---LLPVLTRY--------RQGDKLAVQIWDRGEKLMF 267

Query: 272 -DQTSQGGGSPASATAGATGSQVVQYTVLLDVDNPDGALMAEMTTQVFFVVGQASQVLSA 330
            +   +   +   AT G          +    DN    L+      V   V   S  +  
Sbjct: 268 GEGLLESIDNQIDATTGT-------LRLKARFDNEQELLIPNQFVNVRLRVETLSDAVLI 320

Query: 331 PLAALDDSDNEGLRLAQVFGRDGKVEQRKVRTGLSDRLRVQILDGLSEGDRLVI 384
           P AAL          A V G D KV+ R ++ G S+     +L+GL  G+R+V+
Sbjct: 321 PSAALQFGSRG--TFAYVVGEDNKVQLRLLKAGPSNGETTVVLEGLEVGERVVM 372