Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 95/382 (24%), Positives = 168/382 (43%), Gaps = 36/382 (9%)

Query: 13  LGGLGLLGLGSLLAWTSLPFGAQPVSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQ 72
           L G+GL G    L +T  P  + P+ T+ V+R  IE    A+G + P   V + +Q +G 
Sbjct: 11  LVGVGLAGGYYTLTYT--PESSSPLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKSQINGI 68

Query: 73  IRNLHVEVGDQVHKGQLLVEIDPS-TQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLK 131
           +  ++V  G  V +GQ L+++ P+ T QA  DA          +L +  A L+   Q+L 
Sbjct: 69  VGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA--------STELMQSEANLESDLQRLA 120

Query: 132 RQRDLA--AVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSDEAELGYTR--- 186
               L    +     +D   A+A +   QA +     Q RQ    +RS EA +G  +   
Sbjct: 121 NLERLVKQQIIPANYDDYVRAKADVKAKQAEVQ----QKRQNLELIRSGEASIGQAKLSS 176

Query: 187 -IFAPMDGTVVAVDAREGQTL---NAQQQTPLILRIAKLSPMTVWAQVSEADIGKIQPGM 242
            ++AP+ GT++ +    G+ +    + Q    ++++A +  +     VSE D  ++  GM
Sbjct: 177 TLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGM 236

Query: 243 TAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDV 302
            A  T     ++     + +V  I  + L+      G          G QV     +  +
Sbjct: 237 PASITVAPYPEQVINGQLTKV-AIQSERLNNPENKDGKSFD-----NGFQV----EIGQL 286

Query: 303 DNPDG-ALMAEMTTQVFFVVGQASQVLSAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVR 361
           D P+   L +  +      + +A+ V++ P  AL       + L       G      V+
Sbjct: 287 DIPENMTLRSGFSASAKITLQRAADVITLPERALQFEGETPMVLIADGSAQG-YTAHPVK 345

Query: 362 TGLSDRLRVQILDGLSEGDRLV 383
            GLSD ++V+IL+G++E D +V
Sbjct: 346 LGLSDGVQVEILEGVAEKDSIV 367