Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 421 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  275 bits (704), Expect = 1e-78
 Identities = 167/400 (41%), Positives = 230/400 (57%), Gaps = 31/400 (7%)

Query: 2   RRSTHTRRRLLLGGLGLLGLGS-LLAWTSLPFGAQPVSTV---AVTRADIESSVTALGTL 57
           R+   +RR  +   L L  +G+   AW+    GA P +TV   AVTR DIE SVTA+GTL
Sbjct: 27  RKKRRSRRPWIFALLVLAVVGTGYYAWSRQ--GAPPATTVITQAVTRGDIEESVTAVGTL 84

Query: 58  QPRRYVDVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLA 117
              + VD GAQ SGQ+++LHV +GD+V + QL+ EIDP++ + +++     + NL+AQL 
Sbjct: 85  DAVKSVDAGAQVSGQLKSLHVGIGDKVEQNQLIAEIDPASIENRIEIDEAELANLEAQLV 144

Query: 118 EQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRS 177
            ++AQL L Q  ++RQR+L A  +  +  L  A A      A +   +AQIR+  A+L  
Sbjct: 145 SKKAQLVLKQSNIERQRNLVATNSVSQSTLDQAVADHAAAGADVQAIEAQIRKQKATLAG 204

Query: 178 DEAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQTPLILRIAKLSPMTVWAQVSEADIGK 237
           D  +LGYT+I+APM GT+V   A+EGQTLNA Q TP I+ IA LS MTV AQVSEAD+GK
Sbjct: 205 DRVDLGYTKIYAPMAGTIVDDPAKEGQTLNANQTTPTIVTIADLSTMTVKAQVSEADVGK 264

Query: 238 IQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYT 297
           ++ GM AYFT L    +R+T  +RQ+ P+P                     T + VV Y 
Sbjct: 265 LKLGMDAYFTLLGQPGKRFTGKLRQIEPMPD--------------------TENNVVLYY 304

Query: 298 VLLDVDNPDGALMAEMTTQVFFVVGQASQVLSAPLAALDD-----SDNEGLRLAQVFGRD 352
            L DV NP G LM  M+ QVFFV   A  VL  P AAL       SD        V    
Sbjct: 305 ALFDVPNPTGELMMSMSAQVFFVQAAAKNVLVVPSAALRTVEAAASDGPARAEVTVVAPS 364

Query: 353 GKVEQRKVRTGLSDRLRVQILDGLSEGDRLVIGAPAASGG 392
           G  + R V  G+ +R+  +I+ GL EG+++V+ A +A+ G
Sbjct: 365 GATQTRTVEVGVRNRVSAEIVSGLQEGEKVVVDAASATNG 404