Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 428 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  135 bits (341), Expect = 2e-36
 Identities = 104/332 (31%), Positives = 165/332 (49%), Gaps = 27/332 (8%)

Query: 9   RRLLLGG-LGLLGLGSLLAWTSLPFGAQPVSTVAVTRADIESSVTALGTLQPRRYVDVGA 67
           +R L GG + +L L  LL+      G     T  V    +  +V+A GTL P + VDVG+
Sbjct: 33  KRFLAGGAIAVLALALLLSGGKKSQGQ--FLTETVDSGPLVVTVSASGTLAPTKSVDVGS 90

Query: 68  QASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQ 127
           + SG + ++ V+  +QV KGQLL ++D S  + ++   + ++   +A +A+  A +  A+
Sbjct: 91  ELSGTLESVLVQENEQVKKGQLLAQLDISKLKDQVVKSQAAVAAAEASVAQAVATVAEAR 150

Query: 128 QQLKRQRDLAAVGATR---EEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSDEAELGY 184
             L R R +A +   +   + +L+TAEA L   QA     +A + QA A+L+SDE  +  
Sbjct: 151 ASLSRMRQVAELSGGKVPAKTELETAEATLLRAQANEASARATVTQARATLKSDETNIAK 210

Query: 185 TRIFAPMDGTVVAVDAREGQTLNAQQQTPLILRIAK-LSPMTVWAQVSEADIGKIQPGMT 243
             I +P+DG V+      GQT+ A   TP++  +A+ L+ M +  +V EAD+G +Q G  
Sbjct: 211 ATIRSPVDGVVLTRKVEPGQTVVAAMTTPVLFSLAEDLTQMELQVKVDEADVGSVQVGQQ 270

Query: 244 AYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDVD 303
           A FT  A   R++ + +++V             G GS        T   VV Y  +L V 
Sbjct: 271 ASFTVSAWSGRKFPAQIQRV-------------GIGS-------TTTDNVVTYKTVLKVA 310

Query: 304 NPDGALMAEMTTQVFFVVGQASQVLSAPLAAL 335
           N D AL   MT     +     + L  P AAL
Sbjct: 311 NNDLALRPGMTATAEIITASRDKALLVPNAAL 342