Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 418 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  140 bits (352), Expect = 9e-38
 Identities = 116/349 (33%), Positives = 163/349 (46%), Gaps = 38/349 (10%)

Query: 1   MRRSTHTRRRLLLGGLGLLGLGSLLAWTSL--PFGAQPVSTVAVTRADIESSVTALGTLQ 58
           M+R       L+L  L L G G  +A+  L  P   Q      + + ++  SV+A GTL 
Sbjct: 1   MKRPQKKTVVLILAALLLAG-GGYVAYQKLTAPGLEQRYKLQTLEKGELTQSVSANGTLN 59

Query: 59  PRRYVDVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLAE 118
           P   V+VG Q SG ++ L+V+  DQV +GQ+L E+D S   A+       +    A +A 
Sbjct: 60  PVTLVNVGTQVSGTVKKLYVDFNDQVKQGQILAELDDSLYSAQ-------VHQSDANIAS 112

Query: 119 QRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSD 178
            RA L LA    +R + L A      ++L  A       QAR    QAQ+ Q  A+   D
Sbjct: 113 ARASLDLAIASEERMKSLFAQEYVSRQELDQA------VQARRSA-QAQLNQYKAANDKD 165

Query: 179 EAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQTPLILRIAK-LSPMTVWAQVSEADIGK 237
            A LGY+ I +P+ G VV      GQT+ A  QTP + +IA+ L+ M ++   +EADIG 
Sbjct: 166 RANLGYSVIRSPVSGVVVDRQIDVGQTVAASFQTPTLFKIAQDLTAMQIYTSFAEADIGN 225

Query: 238 IQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYT 297
           I+ G    F   A   R++   V+QV   P                     T   VV Y 
Sbjct: 226 IKVGQPVKFNVDAFPNRQFKGEVKQVRLNP--------------------TTQQNVVTYN 265

Query: 298 VLLDVDNPDGALMAEMTTQVFFVVGQASQVLSAPLAALDDSDNEGLRLA 346
           V++ VDNP+  L+  MT  V   V + S VL  P AAL    N G + A
Sbjct: 266 VVVVVDNPEQILLPGMTAYVNIAVAKRSDVLLVPNAALRYKPNGGQKPA 314