Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 170 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 85.5 bits (210), Expect = 4e-22
 Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 5   YRE----LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDR 60
           YRE    L S+L  +LG  ++A D+A D + R+L R   E +  PRA+L   A  LVVD 
Sbjct: 16  YREHGGWLRSWLRHKLGCAESAADLAQDTFCRILRRENLEGLREPRAYLTTVAHGLVVDH 75

Query: 61  HRRQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIE 120
            RR  + +A  L+AL       +   +    + + L  ++  L  L    R +FLL +++
Sbjct: 76  WRRLEIERAY-LEALAWQPEALAPSPEERALVLEALLEIEALLAALPEKVRQAFLLAQLD 134

Query: 121 GLSHQQIAERLGISRSLVEKHIVNAMKHC 149
           GL +Q+I ERLG+S  +V+K++  AM HC
Sbjct: 135 GLGYQEIGERLGVSERMVKKYMARAMLHC 163