Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 168 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 90.9 bits (224), Expect = 9e-24
 Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 5/148 (3%)

Query: 5   YRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHR-- 62
           YRE+V FLS R G R AA+D A D + ++ +   +E +++ R++++R A N+ VD HR  
Sbjct: 16  YREIVDFLSLRTGCRHAAQDCAQDCWFKLCKARPAEAVDNGRSYVFRVAANIAVDWHRSN 75

Query: 63  -RQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEG 121
            R+L  QA+   A   D    S +    +Q  + L  ++  +  L     + F+L ++EG
Sbjct: 76  GRELRLQAD--YAASGDPTATSPDTLETVQQRRNLERLEAIIRALPPRTVEVFVLNRLEG 133

Query: 122 LSHQQIAERLGISRSLVEKHIVNAMKHC 149
           L++ + A+RLGIS S VEKHI   +  C
Sbjct: 134 LTYTETAKRLGISASAVEKHIARVLLQC 161