Pairwise Alignments

Query, 590 a.a., succinate dehydrogenase flavoprotein subunit from Pseudomonas putida KT2440

Subject, 594 a.a., Succinate dehydrogenase flavoprotein subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  621 bits (1601), Expect = 0.0
 Identities = 320/587 (54%), Positives = 405/587 (68%), Gaps = 8/587 (1%)

Query: 9   FDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWR 68
           +DA+++G GGAG+RA   L + G KTA +TKVFPTRSHTV+AQGGI  A+ +    D+W+
Sbjct: 11  YDALVVGAGGAGLRATFGLVEQGLKTACITKVFPTRSHTVAAQGGIGAALGNM-AEDNWK 69

Query: 69  WHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRPFGGQSKDF 128
           WHMYDTVKG+D++GDQDAIEYMC+E   AV+EL+H G+PFSRTE GRIYQRPFGG  ++F
Sbjct: 70  WHMYDTVKGADWLGDQDAIEYMCREAIPAVYELEHYGVPFSRTEDGRIYQRPFGGHMRNF 129

Query: 129 GKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAFVGVIAICI 188
           G+     R CAA+DRTGHA+L TLYQ +L+    F  EY+A+DL+  +DG   GVIA C+
Sbjct: 130 GEA-PVQRACAAADRTGHAILQTLYQQSLRFNAEFFVEYFALDLII-EDGVCRGVIAWCM 187

Query: 189 ETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIEMWQFHPTG 248
           E G     KS  TVLATGG GR Y S T+A   TGDG GM  RAG+P+QD+E  QFHPTG
Sbjct: 188 EDGTIHRFKSHTTVLATGGYGRAYFSCTSAHTCTGDGNGMVARAGLPLQDMEFVQFHPTG 247

Query: 249 IAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEIIAGNGVGP 308
           I GAG L+TEG RGEGGYL N+ GERFMERYAP AKDLA RDVV+R+M  EI  G GVGP
Sbjct: 248 IYGAGCLITEGARGEGGYLTNSEGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVGP 307

Query: 309 NKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMGGVATNIHG 368
            KDH+ L L+HLG EVLHSRLPGI E +K F+ VD    P+PV+PT HY MGG+ TN HG
Sbjct: 308 KKDHINLHLEHLGPEVLHSRLPGITETAKVFSGVDATRDPIPVLPTVHYNMGGIPTNYHG 367

Query: 369 QAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALSEG 428
           + +       + I PGL AVGE ACVSVHGANRLG NSLLD+VVFGRAA L   + +  G
Sbjct: 368 EVLNPTKADPEAIFPGLMAVGECACVSVHGANRLGTNSLLDIVVFGRAAALRAAEVVKPG 427

Query: 429 VEYRDASDTDVDVALNRLNKLNERTSGEDVASLKRELQSCMQNYFGVFRTGEYMQKGIEQ 488
           + ++       D+AL+RL++L      +  A ++ +LQ  MQ    VFRT + + +G+ +
Sbjct: 428 IAHKPLKADAADLALSRLDRLRSAKGAKLTAEIRDDLQQAMQRDAAVFRTTKSLAEGVAR 487

Query: 489 LAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRGAHAREDFE 548
           +  +   +A++K+ D S  FNT   EALEL+NL+  A+ T   A AR+ESRGAHA EDF 
Sbjct: 488 VDQVAASLADIKLVDTSMIFNTDLAEALELENLMACAQTTIHGAAARQESRGAHAHEDFP 547

Query: 549 DRDDENWLCHTLYY---PGEKRVAKRGVNFAPKT--VPAFEPKVRTY 590
           DRDD+ W+ HTL +    G+  +  R V+    T  +   EPK R Y
Sbjct: 548 DRDDKTWMKHTLAWLDPKGKVTLDYRPVHTFTLTDEIDYIEPKARVY 594