Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  298 bits (762), Expect = 9e-85
 Identities = 175/398 (43%), Positives = 243/398 (61%), Gaps = 4/398 (1%)

Query: 243 EQKQAIAELIQAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTPLSSEQADY 302
           E+K A +EL  ARE+AE ANRAKS+FLA MSHE+RTP  G+LG+L LL  TPL+ +Q  Y
Sbjct: 332 ERKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVLDLLLHTPLNEKQERY 391

Query: 303 TAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSVQSFQHSAQQRGLGL 362
             +A  ST  LL ++NDILD S+IE   L +   + +L  L+    +    +A Q+GL  
Sbjct: 392 IRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAAQKGLEF 451

Query: 363 HLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQVDARWQVLDRQLIWLTCSV 422
              +  GI   +++GDP R+RQI+ NL+ NA+KFT  G V++D     +      L   V
Sbjct: 452 RYHI-KGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIECTRIAPGRQHLRVEV 510

Query: 423 RDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAERMGGKLRGESREGLG 482
           RD+GIG+  +  E +F  F QADSS +R +GGTGLGL+I + L E M G +   S  G G
Sbjct: 511 RDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSSNSGEG 570

Query: 483 STFTLEMPLALANP--APVPLTPPTTVRTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGLA 540
           S F  ++ L  ++P  +PVP+ P  +  T +P + ++LLV+D   NR V+   L      
Sbjct: 571 SCFWFDIELPESDPTVSPVPVLPAGSPITALPRDTRILLVDDTEANREVLAEYLAQAHCQ 630

Query: 541 VCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEATRRIR-QLPNGAGLPIIALTANAL 599
           V  A +GLEAV L    +  A+LMDC++  +DGYEATR+IR Q       PIIALTA  +
Sbjct: 631 VRQAANGLEAVTLAESWQPDAILMDCQMAGMDGYEATRQIRIQEGQRRRTPIIALTAFVM 690

Query: 600 QGDRERCMAAGMDDYLSKPLRRTELQQVLQRWLPGQTT 637
           +GDRE+C+AAGMDDYL KP+    L   + +WL G+ T
Sbjct: 691 RGDREKCLAAGMDDYLPKPVDAQTLIATIGKWLEGRET 728



 Score = 95.1 bits (235), Expect = 1e-23
 Identities = 53/120 (44%), Positives = 68/120 (56%)

Query: 516 QVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYE 575
           ++LLV+DNP  R     +L +LG  V +A  G EA++L     F  VLMDCR+P LDG  
Sbjct: 739 RILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFDLVLMDCRMPGLDGCA 798

Query: 576 ATRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQRWLPGQ 635
            TR  R    G    IIALTA      R +C  AGM+D+L+KP    EL  +L+RWL  Q
Sbjct: 799 TTRAWRARERGTPTAIIALTAGDPDESRAQCREAGMNDFLAKPFSEQELVTLLRRWLAPQ 858