Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  245 bits (625), Expect = 8e-69
 Identities = 158/392 (40%), Positives = 226/392 (57%), Gaps = 12/392 (3%)

Query: 243 EQKQAIAELIQAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTPLSSEQADY 302
           E+K+  AE+++A+E AE ANRAKSDFLA MSHE+RTPMNGV+GM +L   T L+ EQ DY
Sbjct: 391 ERKRWEAEILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDY 450

Query: 303 TAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSVQSFQHSAQQRGLGL 362
                 S   LL +I+DILDFS+IE   L +E I F+L ++  +++++    A Q+GL L
Sbjct: 451 LEAVQMSANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLEL 510

Query: 363 HLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQVDARWQVLDRQLIWLTCSV 422
             +   G+ + ++ GDP R+RQILLNL+GNA+KFTERG+++V             L   V
Sbjct: 511 LARRGPGVPR-RLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCV 569

Query: 423 RDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAERMGGKLRGESREGLG 482
            DTGIGI  ++ E +F AF Q DSS +RR+GGTGLGL+I   L E MGG++  +S  G G
Sbjct: 570 SDTGIGIAPEKQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQG 629

Query: 483 ST--FTLEMPLALANPAPVPLTPPTTVRTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGLA 540
           S   FTL++P   A  AP P          +     +LLV  N   R  ++ +L S G  
Sbjct: 630 SAFHFTLQLPTDGA-AAPEP-------ERRLSGKPALLLVVANARQRCRLQGLLASWGAT 681

Query: 541 VCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEATRRIRQLPNGAGLPIIALTANALQ 600
           V  A  G E + L+ + ++  V+ D R    D  +    + + P    L ++ L+ + ++
Sbjct: 682 VVAAASGAEGLALLEQGQWDGVVADSRPVDGDAGDLLEHLARSPGRVPL-LMLLSPSRMR 740

Query: 601 GDRERCMAAGMDDYLSKPLRRTELQQVLQRWL 632
            +  RC A G+  YL KP    EL + LQ  L
Sbjct: 741 QEIARCKALGVGHYLGKPALADELWRSLQALL 772



 Score = 96.3 bits (238), Expect = 6e-24
 Identities = 64/142 (45%), Positives = 83/142 (58%), Gaps = 6/142 (4%)

Query: 492 ALANPAPVPLTPPTTVRT--TVPDNDQVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLE 549
           AL  PA V   P T      T P   +VLL ED+PVN+ ++  ML  +G  V  A  G E
Sbjct: 770 ALLEPA-VAGVPATVAEAAGTPPAGLEVLLAEDHPVNQQLMRNMLERMGHRVTLARHGGE 828

Query: 550 AVELVGRQRFAAVLMDCRLPHLDGYEATRRIR---QLPNGAGLPIIALTANALQGDRERC 606
           AV    R+RF  VLMD ++P + G +ATR IR   Q    A L I AL+A A + DR+R 
Sbjct: 829 AVAAAARRRFDLVLMDMQMPEMGGEQATRLIRADEQARGLAPLRIYALSAAARREDRQRG 888

Query: 607 MAAGMDDYLSKPLRRTELQQVL 628
           + AGMD YL KPL++ +LQ+VL
Sbjct: 889 LVAGMDGYLLKPLQQKDLQEVL 910