Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  290 bits (742), Expect = 3e-82
 Identities = 169/417 (40%), Positives = 242/417 (58%), Gaps = 18/417 (4%)

Query: 237  LEQASDEQKQAIAELI--------QAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQ 288
            LEQ  ++ +  + EL+        +AR+EAE A+RAKS FLA MSHE+RTPMN +LG+  
Sbjct: 785  LEQELEQHRHHLEELVHARTMELAEARDEAESASRAKSAFLANMSHEIRTPMNAILGLSH 844

Query: 289  LLETTPLSSEQADYTAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSV 348
            LL      +   +       +  HLL +INDILD S+IE   L L+  DF L  L  N+ 
Sbjct: 845  LLGREVGDARARERVDKIHGAATHLLNIINDILDLSKIEAEKLHLDMQDFLLARLFDNAE 904

Query: 349  QSFQHSAQQRGLGLHLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQVDARW 408
               +   + +GL L   L   +  + + GD   ++QIL+N + NA+KF+++G + + AR 
Sbjct: 905  NLLRPQLEAKGLRLERHLDPALPPV-LRGDAMHLQQILVNFLSNAVKFSDQGHITLGARL 963

Query: 409  QVLDRQLIWLTCSVRDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAER 468
                +  + L   V D GIGI  ++   +F AF+QAD+S +R+YGGTGLGL+I++ L   
Sbjct: 964  LSRSQSQVELRLEVADQGIGIAPEQQAALFQAFEQADNSTTRKYGGTGLGLAISKRLIRL 1023

Query: 469  MGGKLRGESREGLGSTFTLEMPLALANPAPVPLTPPTTVRTTVP-------DNDQVLLVE 521
            MGG +  +S+ G GS F + + L +A+ A    T   T    +P          ++LL E
Sbjct: 1024 MGGDIGVDSKPGQGSVFWISLRLEVADTAAG--TTAATAEQELPARLRARHGGCRILLAE 1081

Query: 522  DNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEATRRIR 581
            DN +N+ V + +L   GLAV  AEDG +AV L     F  VLMD  +PHLDG +ATR IR
Sbjct: 1082 DNALNQEVAQDLLHDAGLAVSVAEDGHQAVSLAQSGGFDLVLMDVNMPHLDGLQATRAIR 1141

Query: 582  QLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQRWLPGQTTA 638
            +LP  A LPI+A+TA A   DR RC+ AGM+D+++KP+    L Q L RWLP +T A
Sbjct: 1142 ELPGCADLPILAMTAGAFAEDRARCLEAGMNDFVAKPVVPEVLYQALLRWLPARTPA 1198