Pairwise Alignments

Query, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 353 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (250), Expect = 4e-26
 Identities = 82/333 (24%), Positives = 141/333 (42%), Gaps = 22/333 (6%)

Query: 11  ILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILI 70
           +LLV +  A +W++ PF  A+ W  IL     P+ R L    G    + +       ++ 
Sbjct: 13  LLLVLVTIAFIWILLPFYGAVFWAVILGIVFAPMQRRLQLKFGWHRNVTSLFTLSICVVS 72

Query: 71  VALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAP---AWLGGIPFVGERLVNGWQSLDQ 127
             LP++ +   L   +++  A  + ++   L  A     +   +P   + L      LD+
Sbjct: 73  AILPVIIISTLL---VQEGAALYKSLESGELDIADYLARFKDALPPYFQHL------LDR 123

Query: 128 KGAALLTSIKPYFG----QVGNWLLARSAQIGSGVLELTLS----LVFVFFFYRDGPRLA 179
            G   L  ++        Q   +   ++   G G  +  +S    +  +FFF RDG  L 
Sbjct: 124 FGLGNLNGLRDKIVRSAMQGSEFFATQAFSFGQGTFQFMVSFFVMIYLLFFFLRDGAELV 183

Query: 180 AFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLG 239
             V   +     ++    L      V+  V G +  A +Q  L  + F + G+   +   
Sbjct: 184 RKVRMAIPLAEHQKRRLQLKF-NRVVRATVKGNLLVAISQGALGGLIFWVLGISTVLPWA 242

Query: 240 LVTFMLSLIP-MGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRG 298
           ++   LSL+P +G  L W P   + +  G     V L ++G FVI  VDN L+P L+ + 
Sbjct: 243 VLMAFLSLLPAVGAGLVWAPVAVYFLLSGAIWQGVVLTLFGVFVIGLVDNFLRPILVGKD 302

Query: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAV 331
             +P  +VL+   GGL  FG  G  IGP + A+
Sbjct: 303 TKMPDYMVLVSTLGGLAVFGLNGFVIGPLIAAL 335