Pairwise Alignments

Query, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 436 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  161 bits (407), Expect = 3e-44
 Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 5/340 (1%)

Query: 12  LLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILIV 71
           LLV +L  G++    F+  +L   ++ FASWP+   L + L G  TLAA +  ++ +  +
Sbjct: 83  LLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTLAATIAIISVVAFI 142

Query: 72  ALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGWQSLDQKGAA 131
            +P+        + +RD   +      +G P APAWL  IP VG  L   W        A
Sbjct: 143 VVPISLAAIYAVEEVRDWLVWAVATNANGAP-APAWLATIPAVGAWLGEQWVKYVGHPGA 201

Query: 132 LLTSIKPYFGQ-VGN---WLLARSAQIGSGVLELTLSLVFVFFFYRDGPRLAAFVLRLLH 187
           L   ++   G  +GN    +L   A      L L   L+ +FF YRDG   +  +  L  
Sbjct: 202 LGELVQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDGQSFSKQLDHLGE 261

Query: 188 RLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSL 247
           R+   R E    +V  T+   V G+   A  + ++  + + +AGVP  + LG++T +++L
Sbjct: 262 RIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPSPVTLGILTGIMAL 321

Query: 248 IPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVL 307
           IP G PL +   + +LV  G     + L  WGT  +  VD  L+P L+     LP +   
Sbjct: 322 IPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRLVGGPIKLPFLPTF 381

Query: 308 LGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQQP 347
            G+ GG+   GF+GLF+GP L+A+  ++  +W R    QP
Sbjct: 382 FGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQP 421