Pairwise Alignments

Query, 884 a.a., sensor protein from Pseudomonas putida KT2440

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  110 bits (276), Expect = 3e-28
 Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 562 AAADWAWQHG---QAAGHGSDTLPNGRWWWW-PLAVDDQPLALLGVRPRNGQPLSDPRRR 617
           AA  WA   G   +   H +D + +G+     P +  D+   L     R    L    R 
Sbjct: 386 AARGWAAHLGMRIEQLAHAADAMASGQLQQQIPTSGRDELTVLAQAFNRMAVTL----RE 441

Query: 618 LLTALGQPLAQALARARLA-EQLEAARLHGET-EQLRSALLASVSHDLRTPLTAMRGSID 675
           LL +L   + +  A  R   ++LE AR   E   Q +SA LA++SH+LRTPL A+ G  +
Sbjct: 442 LLVSLEHRVQERTAALRETNDRLEQAREQAEAANQAKSAFLANMSHELRTPLNAIIGYSE 501

Query: 676 SLL-ALGDAIPAEDRRELLEGTRNEAERLDRYIQNLLDMTRLGHGGLKLARDWVAPADIV 734
            ++    D I  E+         N  + L   I ++LD++++  G ++L  +  +  +++
Sbjct: 502 MMMEEAEDGIEVEELLPDFRKINNAGKHLLELINSILDLSKIEAGRMELYLESFSLPELI 561

Query: 735 GSALNRLRVVLAPL------RVHTDVPTELPLLFVHAALIEQALVNVLENAARFSPANGR 788
               N ++ ++ PL      ++  D P ++ L+      + Q L+N+L NA++F+   G 
Sbjct: 562 ----NGVKSIIKPLIEKNQNQLLVDCPADIGLMTADVTKLRQTLLNLLSNASKFT-HQGT 616

Query: 789 LELQVAVHDDQLRLTVSDQGPGIPEADREKIFDMFYTAARG-DRGGQGTGLGLAICQGMI 847
           ++LQVA   DQ+   V D G G+     ++IF+ F  A     R   GTGLGL+I +  I
Sbjct: 617 IQLQVAAQGDQVVFKVVDSGIGMSPEQIDRIFEAFAQADDSTTRKFGGTGLGLSISRHFI 676

Query: 848 GAHGGQILVGEGIDGQGTSITLCLPLPPQP 877
              GG+I V E + G+G++ T+ LP   QP
Sbjct: 677 EMMGGKITV-ESVLGEGSTFTITLPRQVQP 705