Pairwise Alignments

Query, 884 a.a., sensor protein from Pseudomonas putida KT2440

Subject, 529 a.a., PAS domain S-box-containing protein from Paraburkholderia graminis OAS925

 Score =  106 bits (264), Expect = 4e-27
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 25/294 (8%)

Query: 604 RPRNGQPLSDPRRRLLTALG--QPLAQALARARLAEQLEAARLHGETEQLRSALLASVSH 661
           R +  Q L   R+R  +AL   Q   QALAR+R  ++L  A      ++ +   LA++ H
Sbjct: 123 RQKYEQELLLARKRAESALAEQQKAQQALARSR--DELAQA------DRRKDEFLATLGH 174

Query: 662 DLRTPLTAMRGSIDSLLALGDAIPAEDRRELLEGTRNEAERLDRYIQNLLDMTRLGHGGL 721
           +LR PL++M   +  L          DR   + G   + + + R + +LLD++R+  G L
Sbjct: 175 ELRNPLSSMHNVLAILRRQSSGDTEMDRMHGMLG--RQVDYVTRLVSDLLDVSRIAQGKL 232

Query: 722 KLARDWVAPADIVGSALNRLRVVL--APLRVHTDVPTELPLLFVHAALIEQALVNVLENA 779
           +L R     A +V  A+  ++  +  A   +   V  E   L      + Q L N+L NA
Sbjct: 233 QLRRQPTELASVVRDAVEMVQSSIDSAAQSLTVSVCPEPVELDADPVRLTQVLFNLLHNA 292

Query: 780 ARFSPANGRLELQVAVHDDQLRLTVSDQGPGIPEADREKIFDMF-YTAARGDRGGQGTGL 838
           ++++P  G + L VA   D   ++V D G GI   +   +FDMF       +R   G G+
Sbjct: 293 SKYTPQGGCISLCVATDSDCAVISVCDSGVGIAAEELRAVFDMFAQVPGSAERSQGGLGI 352

Query: 839 GLAICQGMIGAHGGQILVGEGIDGQGTSITLCL----------PLPPQPEAESE 882
           GLA+ +G++  HGG I       G+G+   + +          PLPP PE +S+
Sbjct: 353 GLALVRGLVALHGGTIEARSEGPGKGSEFVVRVPLANDRTRREPLPPAPEGQSQ 406