Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 9/260 (3%)

Query: 1   MAFTSDSLAIFLAVLDAGSFSAAARKLGRVPSAVSMAIAQLEAELDLPLFDRATRKALPT 60
           M F+  SL +  AV   GSF+AAA  L +VPSA+S ++ Q+E+EL + LF R  RK   T
Sbjct: 1   MMFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELT 60

Query: 61  NAALALEPQARQVICQLNLLDAQALQLHKGLEKRLTIAMAPELQTGRWSQPLEILAQAFP 120
            A      +ARQ++ Q+  + AQ  +   G  K L + +   ++  +    +E   Q F 
Sbjct: 61  PAGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFD 120

Query: 121 SLEVEVRSATQTEAIRLLHDGSVQLAL-VFERPGIDERESFLEAGSQLLVAVASPRHPAG 179
             E+++       +   +  G   + +       +       + G      V SP HP  
Sbjct: 121 FAELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHPCV 180

Query: 180 QNSGSPLPEEAFAEQRQIIVASGKATGSDPRMV----LSRRIWLTDSYLATLDLVQSGLG 235
           +        E F  Q   I     ++    R        RR+ L + Y A ++ ++SGLG
Sbjct: 181 REQNL---SEGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSA-IESLKSGLG 236

Query: 236 WAYLPQPLVEPLIASGALAE 255
             Y+P+ + +PL+ASG L E
Sbjct: 237 VGYMPRHMAQPLLASGQLVE 256