Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  139 bits (351), Expect = 6e-38
 Identities = 85/253 (33%), Positives = 129/253 (50%), Gaps = 2/253 (0%)

Query: 4   TSDSLAIFLAVLDAGSFSAAARKLGRVPSAVSMAIAQLEAELDLPLFDRATRKALPTNAA 63
           T + L +FLA ++ GSFSAAAR+L +V SAVS  I  +E + D  LFDR+ R  + T A 
Sbjct: 3   TLEQLQLFLATVETGSFSAAARRLNKVQSAVSQQIINMEIDCDKQLFDRSGRYPVLTPAG 62

Query: 64  LALEPQARQVICQLNLLDAQALQLHKGLEKRLTIAMAPELQTGRWSQPLEILAQAFPSLE 123
             L PQ + VI Q   L +    L  GL ++  +A+   +     SQ L + A  +P ++
Sbjct: 63  QTLLPQVKAVIAQHLRLQSLISSLDAGLPQQFRLAIDEGVPFSELSQHLNLFADKYPLMQ 122

Query: 124 VEVRSATQTEAIRLLHDGSVQLALVFERPGIDERESFLEAGSQLLVAVASPRHPAGQNSG 183
           +E+R     E I  +   +V + ++F      ++  F   GS     V SP HP  +   
Sbjct: 123 LELRMLPSKEIIEQVRQQNVDMGVIFSEEIYPQQIDFESLGSVKFEPVVSPNHPLAKAET 182

Query: 184 SPLPEEAFAEQRQIIVASGKATGSDPRMVLSRRIWLTDSYLATLDLVQSGLGWAYLPQPL 243
           + L  +     RQ+ + S +   S  +   S ++WL DSY A LDL +SG GW  LP+ L
Sbjct: 183 NNL--DQLKLHRQLTIGSKQTQQSSFQAEHSPQLWLADSYYALLDLAKSGFGWTLLPEHL 240

Query: 244 VEPLIASGALAEV 256
           V+  +A G L  +
Sbjct: 241 VQDALAQGQLCPI 253