Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 307 a.a., DNA-binding transcriptional activator AllS from Klebsiella michiganensis M5al

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 19/259 (7%)

Query: 6   DSLAIFLAVLDAGSFSAAARKLGRVPSAVSMAIAQLEAELDLPLFDRATRKALPTNAALA 65
           ++L  F++V ++GSFS AA KL +  + +S  I  LE    + LF R TR  L T A + 
Sbjct: 5   ETLRTFVSVAESGSFSRAAEKLYKTTATISYRIKLLEDNTGVALFSRTTRSVLLTPAGMH 64

Query: 66  LEPQARQVICQLNLLDAQALQLHKGLEKRLTIAMAPELQTGR-WSQPLEILAQAFPSLEV 124
           L  QAR+ +  ++ +  +  Q++ G+E+++ I +   +   +  ++ L  L+Q +P  + 
Sbjct: 65  LLAQAREWLGWIDSMPGELQQINDGVERQVNIVVNNLMYDPQAIARLLAWLSQRYPFTQF 124

Query: 125 EV-RSATQTEAIRLLHDG-SVQLALVFERPGIDERESFLEAGSQLLVAVASPRHPAGQNS 182
              R         LLHD  S+ + +    P + E  +    G    + V SP HP GQ S
Sbjct: 125 HFSRQIYMGVWDTLLHDDFSLAIGVTGTEP-LGENIAVTPLGEVSWLFVMSPHHPLGQQS 183

Query: 183 GSPLPEEAFAEQRQIIVASGKATGSDPRMVLSRRIW--------LTDSYLATLDLVQSGL 234
             PL E        + +          R +  R  W        +       +    +G+
Sbjct: 184 -DPLSEAQLRRYPAVNIE------DSARRLTKRVAWRLPGQKEIVVPDIETKIAAHIAGV 236

Query: 235 GWAYLPQPLVEPLIASGAL 253
           G  +LP+PL +PLIA G L
Sbjct: 237 GIGFLPEPLCQPLIARGEL 255