Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  414 bits (1065), Expect = e-120
 Identities = 222/555 (40%), Positives = 346/555 (62%), Gaps = 35/555 (6%)

Query: 5   NLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 64
           +L+EV++L +E+ +   V+  V  ++ DI++GE + +VGESG+GKS   ++++ LL  P 
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP- 60

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
                G +   G+ +   S + ++ +RG++I  IFQ+PMTSLNPL  +E Q+ E +  + 
Sbjct: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
            ++ +EA  R L L+  VGIP+P  RLK  PH+ SGG RQRV+IA+ALA EP+L+IADEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
           TTALDV++Q +IL L++EL  +  +  +L++HD+ +V  +  RV VM RG +VE    A 
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 245 LFSSPQHHYTQMLINAEPSG-------------------------------LPAHNPVGA 273
           +  +P+H YT+ LI+A P                                    H     
Sbjct: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300

Query: 274 PLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAIL 333
           PLL+V+++ + F  K    +   ++V+A + V+F++ +G+T G+VGESGSGKST+   I 
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 334 RLISSQGG-IRFHGQNLEGL-NQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRI 391
            L     G + F G +L  L ++   RPLRR+MQ+VFQ+P+ S++PRM + DI+ E +R 
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420

Query: 392 HRIGTAQEQEAAII-AALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDE 450
           H++  ++ +   I+   LE VGL      +YPHEFSGGQRQRI+IARAL  +P L++ DE
Sbjct: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480

Query: 451 PTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQ 510
           PTSALD +VQ Q++ LL++LQ + NLT LFISHDL V++ +  ++ V++ G ++E    +
Sbjct: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540

Query: 511 AIFHAPQHPYTRQLL 525
            +F  PQH Y+++L+
Sbjct: 541 QLFTDPQHEYSKKLI 555



 Score =  178 bits (452), Expect = 4e-49
 Identities = 114/266 (42%), Positives = 159/266 (59%), Gaps = 17/266 (6%)

Query: 6   LIEVRDLAVEFVTGDQVN-------RVVDGVSFDIRKGETLALVGESGSGKSVTAHSILR 58
           L++V ++ + FVT D +        +  + VSF + +GET  LVGESGSGKS  A  I  
Sbjct: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361

Query: 59  LLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINE 118
           L      +  +G + +EG DL     +  +R    ++ M+FQ P TS+NP   I   I E
Sbjct: 362 LY-----QPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAE 416

Query: 119 ILLLHKGLTGKEATARTL--ELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEP 176
            +  HK LT  E+  R +  +LL+ VG+ +    LK  PHE SGGQRQR+ IA ALA  P
Sbjct: 417 PIRFHK-LTRSESETRQIVNDLLEHVGLGK-MAGLK-YPHEFSGGQRQRISIARALATRP 473

Query: 177 ELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQI 236
            LLI DEPT+ALDV+VQ +IL LLK+LQ  + + +L ISHDL ++R++  RV VMQ G +
Sbjct: 474 RLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTL 533

Query: 237 VEQAECATLFSSPQHHYTQMLINAEP 262
           +E A    LF+ PQH Y++ LI+  P
Sbjct: 534 LEVAPTEQLFTDPQHEYSKKLISLMP 559



 Score =  169 bits (427), Expect = 3e-46
 Identities = 96/261 (36%), Positives = 160/261 (61%), Gaps = 15/261 (5%)

Query: 275 LLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILR 334
           LLEV +L++ +P + G       H  AV  +   + +G+ +G+VGESG+GKST+G A++ 
Sbjct: 3   LLEVKNLRIEYPSRHGV------HA-AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55

Query: 335 LISSQGGIR-----FHGQNLEGLNQKAVRPLR-REMQVVFQDPFGSLSPRMCVADIVGEG 388
           L+S  G I       +G+ + GL+ +A+R +R  ++  +FQDP  SL+P   V   + E 
Sbjct: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115

Query: 389 LRIHRIGTAQEQEAAIIAALEEVGL-DPRTR-HRYPHEFSGGQRQRIAIARALVLKPALI 446
           +  +   +A+E     ++ +++VG+  P  R  +YPH+FSGG RQR+ IA AL  +P LI
Sbjct: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175

Query: 447 LLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQ 506
           + DEPT+ALD ++Q Q++ L+R L +K N+  + ++HD+ VV  ++ ++ V+  G +VE 
Sbjct: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235

Query: 507 GDAQAIFHAPQHPYTRQLLEA 527
           G    +   P+HPYTR L+ A
Sbjct: 236 GPTAKVLGTPEHPYTRSLISA 256