Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  485 bits (1248), Expect = e-141
 Identities = 260/542 (47%), Positives = 361/542 (66%), Gaps = 19/542 (3%)

Query: 5   NLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 64
           +L+ V+DL V+  T      VV+ +SFD+  G TL L GESGSGKS+TA S+++LLP P+
Sbjct: 4   SLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPM 63

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
           AR   GS   +G+D+L   E  ++RIRG +I MIFQEPMTSLNP+  +  Q+   +  H 
Sbjct: 64  ARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHG 123

Query: 125 GLTGKEAT-ARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183
             +G+ A  AR  ELLD V IPEP +RL   PHELSGG RQR++IAMALA  P++LIADE
Sbjct: 124 NTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKILIADE 183

Query: 184 PTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECA 243
           PTTALDVTVQ +IL L+++LQA  G+++++I+HD+ +V  +A  V VM+ G+ VE A   
Sbjct: 184 PTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHATSR 243

Query: 244 TLFSSPQHHYTQMLINAEP----------------SGLPAHNPVGA--PLLEVDDLKVWF 285
            LF+ PQ  YT+ L++A P                  + A +  GA  P+L+V++L V F
Sbjct: 244 DLFAHPQDAYTKELLSAVPRLGEMAGTETPKRAAGKAVEAGSEPGAEQPMLQVENLTVRF 303

Query: 286 PIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFH 345
            IK G LQR V  + AV+G++ S+ +G+TL +VGESG GKST G A+L L+   G IR  
Sbjct: 304 DIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLNLVPWTGDIRVD 363

Query: 346 GQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAII 405
           G++  GL    +RP+ R++Q++FQDP+ SL PRM V D+V E L IH + +  E    + 
Sbjct: 364 GRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHGLASGSELRDRVE 423

Query: 406 AALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVE 465
              + VGL P    RYPHEFSGGQRQRI IARAL L P LI+ DE  +ALD ++Q QV++
Sbjct: 424 YLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQAQVLD 483

Query: 466 LLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLL 525
           LL+++Q +  ++YLFISHD+AVV+ +SH++ V+  G  VE G  + IF +PQHPYT++L+
Sbjct: 484 LLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESPQHPYTKKLM 543

Query: 526 EA 527
            A
Sbjct: 544 AA 545



 Score =  187 bits (475), Expect = 9e-52
 Identities = 111/273 (40%), Positives = 165/273 (60%), Gaps = 18/273 (6%)

Query: 2   SEQNLIEVRDLAVEF-VTGDQVNR------VVDGVSFDIRKGETLALVGESGSGKSVTAH 54
           +EQ +++V +L V F + G  + R       V+G+S  +R+GETL+LVGESG GKS T  
Sbjct: 289 AEQPMLQVENLTVRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGK 348

Query: 55  SILRLLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEK 114
           ++L L+P+      +G IR +G+        T++ I  + + MIFQ+P  SL+P   +  
Sbjct: 349 ALLNLVPW------TGDIRVDGRSTRGLRGSTMRPILRD-VQMIFQDPYASLDPRMRVGD 401

Query: 115 QINEILLLHKGLTGKEATARTLELLDMVGI-PEPRKRLKALPHELSGGQRQRVMIAMALA 173
            + E L++H   +G E   R   L   VG+ PE  KR    PHE SGGQRQR+ IA AL+
Sbjct: 402 LVAEPLVIHGLASGSELRDRVEYLFKRVGLSPEQMKRY---PHEFSGGQRQRICIARALS 458

Query: 174 NEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQR 233
             P+L++ADE   ALDV++Q ++L+LL+++Q   G++ L ISHD+ +V +I+HRV VM  
Sbjct: 459 LSPKLIVADESVAALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYM 518

Query: 234 GQIVEQAECATLFSSPQHHYTQMLINAEPSGLP 266
           G+ VE      +F SPQH YT+ L+ A P   P
Sbjct: 519 GRFVEMGTRRQIFESPQHPYTKKLMAAVPVADP 551