Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 567 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  410 bits (1055), Expect = e-119
 Identities = 227/535 (42%), Positives = 333/535 (62%), Gaps = 12/535 (2%)

Query: 5   NLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 64
           +++ VRDL V+     +   ++DG+S D+ KGE L LVGESGSGKS+   +++RLLP  L
Sbjct: 4   SVLSVRDLTVKAHLQGETRTLLDGISLDLAKGEILGLVGESGSGKSLFCRALVRLLPSSL 63

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
            +   G++   G+DL   ++  +  +RG  I MIFQ P + L+P+  I  QI E +  H+
Sbjct: 64  LKIEGGAVLLGGRDLTAVTDAEMLEVRGAEIGMIFQNPTSHLDPVMRIGDQIAEGIRYHQ 123

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
           GL G++A A  +E+L  +G PEP ++  + PHELSGG RQR MI +AL+  P++LIADEP
Sbjct: 124 GLGGRDARAAAVEILGQIGFPEPVRQYDSYPHELSGGMRQRAMIGVALSCNPQILIADEP 183

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
           TTALDVT+Q +IL+LL +++ R G++++LI+HDL +V +   R+ VM+ G+++EQ    T
Sbjct: 184 TTALDVTIQAQILKLLMDIRDRRGLSIILITHDLGIVAQTCDRIAVMRGGKLLEQGPKRT 243

Query: 245 LFSSPQHHYTQMLINAEPS---------GLPA-HNPVGAPLLEVDDLKVWFPIKKG-FLQ 293
           + S+PQ  YT  LI++ PS          LPA  +     LLE+DDL V FP     F  
Sbjct: 244 ILSAPQDPYTVRLIHSHPSMPEAVLPATSLPAPSHGATRSLLEIDDLHVRFPSGGSLFRG 303

Query: 294 RTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLIS-SQGGIRFHGQNLEGL 352
           +    V AV G++  +  G+T+GIVGESGSGKSTL  A+L L   S G + F G +L   
Sbjct: 304 KNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAMLGLTPISAGHVSFDGIDLSQQ 363

Query: 353 NQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVG 412
               +  LR E  +VFQDPF +L+PR+ +   + E L++ +     +  A I   L+ VG
Sbjct: 364 RGAGLTRLRHESAMVFQDPFNALNPRLTIGQTLAEVLKVQKKIGGADIPARIGELLDLVG 423

Query: 413 LDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQ 472
           L+    HR P   SGGQ QR  IARAL + P LI+ DE  +ALD T+Q Q+V+L R L +
Sbjct: 424 LEREFAHRKPRSMSGGQCQRAGIARALAVDPRLIIADECVAALDVTIQAQIVDLFRKLAR 483

Query: 473 KYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
             NLT +FI+HDLA+V+ L  + +V+  G ++E+G ++ +F  P+HPYT  L+ A
Sbjct: 484 DLNLTLIFIAHDLAIVRNLCERTVVMHRGEIIEEGRSEDVFSRPKHPYTAALIAA 538



 Score =  186 bits (472), Expect = 2e-51
 Identities = 112/277 (40%), Positives = 162/277 (58%), Gaps = 16/277 (5%)

Query: 4   QNLIEVRDLAVEFVTGDQVNR--------VVDGVSFDIRKGETLALVGESGSGKSVTAHS 55
           ++L+E+ DL V F +G  + R         V G+S  I  GET+ +VGESGSGKS  A +
Sbjct: 282 RSLLEIDDLHVRFPSGGSLFRGKNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARA 341

Query: 56  ILRLLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQ 115
           +L L P       +G + ++G DL QQ    L R+R +  AM+FQ+P  +LNP   I + 
Sbjct: 342 MLGLTPIS-----AGHVSFDGIDLSQQRGAGLTRLR-HESAMVFQDPFNALNPRLTIGQT 395

Query: 116 INEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANE 175
           + E+L + K + G +  AR  ELLD+VG+       K  P  +SGGQ QR  IA ALA +
Sbjct: 396 LAEVLKVQKKIGGADIPARIGELLDLVGLEREFAHRK--PRSMSGGQCQRAGIARALAVD 453

Query: 176 PELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQ 235
           P L+IADE   ALDVT+Q +I++L ++L   + + L+ I+HDL +VR +  R  VM RG+
Sbjct: 454 PRLIIADECVAALDVTIQAQIVDLFRKLARDLNLTLIFIAHDLAIVRNLCERTVVMHRGE 513

Query: 236 IVEQAECATLFSSPQHHYTQMLINAEPSGLPAHNPVG 272
           I+E+     +FS P+H YT  LI A P   P  + +G
Sbjct: 514 IIEEGRSEDVFSRPKHPYTAALIAAIPDIDPDRSLLG 550