Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  461 bits (1185), Expect = e-134
 Identities = 265/554 (47%), Positives = 347/554 (62%), Gaps = 30/554 (5%)

Query: 3   EQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPY 62
           +Q ++ V +L   F      + VV GVSFDI   ET+A+VGESGSGKSVTA SI+RL   
Sbjct: 24  KQPVLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNS- 82

Query: 63  PLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLL 122
           P      GS++  GK+LL  S+  +++IRGN IAMIFQEPMTSLNP+  I  QI E L+L
Sbjct: 83  PRGTKIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLIL 142

Query: 123 HKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIAD 182
           H+GL+  +A   T+ LL+ V IP  + R    PH  SGG RQRVMIAMALA +P+LLIAD
Sbjct: 143 HRGLSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIAD 202

Query: 183 EPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAEC 242
           EPTTALDVT+Q +ILEL+KELQ   GM++L I+HD+ +V  IA R  VM +GQ VE A  
Sbjct: 203 EPTTALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETAST 262

Query: 243 ATLFSSPQHHYTQMLINAEPS-------GLPAHNPV---------------------GAP 274
             +F+ P H YT+ L++A P          P   PV                       P
Sbjct: 263 DDIFNRPNHPYTRSLLSAVPKLGSMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKVSERP 322

Query: 275 LLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILR 334
           +LEV  L   F +K G        V AV+ V+FS+  G+TL +VGESG GKST G +++R
Sbjct: 323 VLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMR 382

Query: 335 LISSQGG-IRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHR 393
           L+   GG +   G ++  L+Q  +R  R  MQ++FQDP+ SL+PRM +   + E L I+ 
Sbjct: 383 LVEPSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLING 442

Query: 394 IGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTS 453
            G   E    +   L++VGL P    R+PHEFSGGQRQRI IARAL L+P LI+ DE  S
Sbjct: 443 KGGQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVS 502

Query: 454 ALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIF 513
           ALD +V+ QVV L+ +LQ +  L YLFISHD+AVV+ +SH++ V+  G +VE G  +AIF
Sbjct: 503 ALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIF 562

Query: 514 HAPQHPYTRQLLEA 527
             PQHPYTR+LL A
Sbjct: 563 QNPQHPYTRRLLSA 576



 Score =  200 bits (509), Expect = 1e-55
 Identities = 124/276 (44%), Positives = 169/276 (61%), Gaps = 19/276 (6%)

Query: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDG-------VSFDIRKGETLALVGESGSGKSVTA 53
           +SE+ ++EV  L   F     +   V G       VSF I+ GETLALVGESG GKS T 
Sbjct: 318 VSERPVLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTG 377

Query: 54  HSILRLLPYPLARHPSGS-IRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCI 112
            S++RL+       PSG  +  +G D+L+ S+  L+  R N + MIFQ+P  SLNP   I
Sbjct: 378 RSVMRLV------EPSGGLVLLDGVDVLKLSQNELRHQR-NHMQMIFQDPYASLNPRMNI 430

Query: 113 EKQINEILLLHKGLTGKEATARTLELLDMVGI-PEPRKRLKALPHELSGGQRQRVMIAMA 171
              I E LL++      E   +  ELL  VG+ P+  KR    PHE SGGQRQR+ IA A
Sbjct: 431 GTAIAEPLLINGKGGQSEVADKVAELLQKVGLSPDMAKRF---PHEFSGGQRQRICIARA 487

Query: 172 LANEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVM 231
           LA EP+L++ADE  +ALDV+V+ +++ L+ +LQARMG+A L ISHD+ +V R++HRV VM
Sbjct: 488 LALEPKLIVADEAVSALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVM 547

Query: 232 QRGQIVEQAECATLFSSPQHHYTQMLINAEPSGLPA 267
             G+IVE      +F +PQH YT+ L++A P   PA
Sbjct: 548 YLGEIVEAGSREAIFQNPQHPYTRRLLSAVPIADPA 583