Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  396 bits (1018), Expect = e-115
 Identities = 223/531 (41%), Positives = 329/531 (61%), Gaps = 13/531 (2%)

Query: 1   MSEQNLIEVRDLAVEFV-TGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRL 59
           M+   L+ V  L++E   TG QV   V  VSFD+  GE   +VGESGSGK++   +++ L
Sbjct: 1   MTMDKLLTVCGLSLEVARTGQQV---VKSVSFDLAPGEIFGIVGESGSGKTLATRALISL 57

Query: 60  LPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEI 119
           LP P  +   GS+ Y+G+D+L+  E  L+ +RG  I ++FQEPMTSLNP   I +Q+ E 
Sbjct: 58  LP-PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEG 116

Query: 120 LLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELL 179
           L+LH   + +E  +  L++L  VGI +P   L + PHE SGG RQR+M+A  +  +P LL
Sbjct: 117 LILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALL 176

Query: 180 IADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQ 239
           IADEPTTALD  +Q  ++EL+ EL    G A+LLISHDL +V R   R+ VM++G IVE+
Sbjct: 177 IADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEK 236

Query: 240 AECATLFSSPQHHYTQMLINAEP-SGLPAH-NPVGAPLLEVDDLKVWFPIKKGFLQRTVD 297
                L  +PQH YT+ L+++ P  G P   +    P++   D+ V +  +K   ++   
Sbjct: 237 GRTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKP 296

Query: 298 HVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLIS-SQGGIRFHGQNLEGLNQKA 356
             +A+ GV+  + +G+ + +VG SGSGK+TLG  I  L++ S+G I+F G+       + 
Sbjct: 297 K-RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTEN 351

Query: 357 VRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPR 416
               R   Q+VFQDP+ SL PRM +  +V E LR       + +    +  LEEVGL   
Sbjct: 352 WTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVD 411

Query: 417 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNL 476
              RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L  +LQ++Y  
Sbjct: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471

Query: 477 TYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           + LFISHDL VV+ ++ +++V++ G ++E+GD   IF +P+  YTR+LL A
Sbjct: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522



 Score =  181 bits (458), Expect = 8e-50
 Identities = 110/264 (41%), Positives = 156/264 (59%), Gaps = 18/264 (6%)

Query: 6   LIEVRDLAVEFV------TGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRL 59
           +I  RD+ V++         ++  R + GVS DI +GE +ALVG SGSGK+    +I  L
Sbjct: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333

Query: 60  LPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEI 119
           +         G I+++G+   +    T  R+      M+FQ+P +SL+P   IE  + E 
Sbjct: 334 VT-----ESEGRIQFQGRP--RTENWTDYRLN---CQMVFQDPYSSLDPRMTIEALVEEA 383

Query: 120 LLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELL 179
           L    GL GK    RTLE L+ VG+          PHELSGGQRQRV IA A+A  P  L
Sbjct: 384 LRPVPGLDGKAKRKRTLETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARRPRFL 441

Query: 180 IADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQ 239
           IADEP +ALDVTV+ ++L+L  +LQ R G + L ISHDL +V ++A RV VMQ G+I+E+
Sbjct: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501

Query: 240 AECATLFSSPQHHYTQMLINAEPS 263
            +  T+F SP+  YT+ L++A P+
Sbjct: 502 GDRDTIFDSPKEAYTRRLLSAIPA 525