Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  494 bits (1272), Expect = e-144
 Identities = 263/531 (49%), Positives = 376/531 (70%), Gaps = 4/531 (0%)

Query: 3   EQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPY 62
           E+ +I+ R +AV F   +   + V  VSF + +GET+A+VGESGSGKSVTA +++ LL  
Sbjct: 22  ERPVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSK 81

Query: 63  PLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLL 122
                P   I Y+G+D+L+ S++  + +RG+RI+MIFQEPM+SLNP++ I  QI E +  
Sbjct: 82  RATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRA 141

Query: 123 HKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIAD 182
           H+ ++ + A  R LELL  V IP+P  RL   PH+LSGGQRQRVMIAMALAN+P++LIAD
Sbjct: 142 HRRVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIAD 201

Query: 183 EPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAEC 242
           EPTTALDVTVQ +IL L+++LQ  +GMA++LI+HDL +VR+ +  V VMQ G++ E    
Sbjct: 202 EPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTT 261

Query: 243 ATLFSSPQHHYTQMLINAEPSGLPAHNPVGAP-LLEVDDLKVWFPIKK-GFLQRTVDHVK 300
             LF+ PQH YT+ L+++EPSG     P  AP LL+  +++V F +KK GF +     + 
Sbjct: 262 EALFADPQHAYTRRLLSSEPSGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELV 321

Query: 301 AVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGG-IRFHGQNLEGLNQKAVRP 359
           AVDG++ +L + +TLG+VGESGSGK+T G A++RL+++ GG I F G+ +   ++K +RP
Sbjct: 322 AVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRP 381

Query: 360 LRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIG-TAQEQEAAIIAALEEVGLDPRTR 418
           LR ++Q+VFQDPF SL+PRM V  I+ EGL ++ +G   +++   +  AL   G+     
Sbjct: 382 LRSKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNIL 441

Query: 419 HRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTY 478
            R+PHEFSGGQRQRIAIARA+ L+P  ILLDEPTSALD +VQ Q++ELLR LQ +  L+Y
Sbjct: 442 SRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSY 501

Query: 479 LFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAF 529
           L ISHDL VV+AL H+++V++ G +VE+G    + + P+  YT +L++AAF
Sbjct: 502 LVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKAAF 552