Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  385 bits (990), Expect = e-111
 Identities = 244/566 (43%), Positives = 331/566 (58%), Gaps = 41/566 (7%)

Query: 2   SEQNLIEVRDLAVEF-VTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60
           S  +L+ V  L + F V G +V   V G +F I  G   ALVGESGSGKS  + +I+ +L
Sbjct: 3   SGADLLRVEGLRITFSVLGGEVE-AVRGANFRILPGRVTALVGESGSGKSAISQAIMGIL 61

Query: 61  PYP-------LARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIE 113
           P         L   P           L +  + +Q IRG RI+ IFQEPMTSL+PLH I 
Sbjct: 62  PSVASVGGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIG 121

Query: 114 KQINEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALA 173
            QI+E+L +H          RT ELL  VG  +P++     P ELSGG RQR MIAMAL 
Sbjct: 122 NQISEVLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALI 181

Query: 174 NEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQR 233
             P LLIADEPTTALDVTVQ +IL+LL+ELQ+++ MA+LLI+HDL +V  +A  V V+  
Sbjct: 182 CRPALLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVIYH 241

Query: 234 GQIVEQAECATLFSSPQHHYTQMLINAEP-------SGLPA--HNPVGA----------- 273
           G+IVE      +F +P+H Y + L+ A P         L A    PV A           
Sbjct: 242 GEIVEAGPVDAIFRNPRHPYLKGLMAAVPHFDMKPGERLKALREVPVKAGAIVGDREVKK 301

Query: 274 -----PLLEVDDLKVWFPIKKG--FLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKS 326
                 L+ V +L   F  +    F   T    +AVD V+F + +G+ LG+VGESG GK+
Sbjct: 302 AAGPNVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKT 361

Query: 327 TLGLAILRLIS-SQGGIRFH----GQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCV 381
           T+   ++R ++  +G I F       ++  L+   ++ LR ++Q+VFQDP  SLSPRM V
Sbjct: 362 TVSKILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSPRMTV 421

Query: 382 ADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVL 441
            +I+ E L IH  GT + +E  + + L+ VGLD R  +RYPH FSGGQRQRI IARAL L
Sbjct: 422 KNILSEPLEIHGRGTPKSREEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIARALAL 481

Query: 442 KPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHG 501
            P L++ DEP SALD +VQ Q++ LL++LQ++  LT LFISH+LAVV  ++ ++ V+  G
Sbjct: 482 VPQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAG 541

Query: 502 HVVEQGDAQAIFHAPQHPYTRQLLEA 527
            +VE    + +   P HPYTR LL A
Sbjct: 542 RIVELAPREVLMRNPVHPYTRSLLAA 567



 Score =  170 bits (431), Expect = 1e-46
 Identities = 108/270 (40%), Positives = 157/270 (58%), Gaps = 21/270 (7%)

Query: 6   LIEVRDLAVEFVTGDQV---------NRVVDGVSFDIRKGETLALVGESGSGKSVTAHSI 56
           L+ VR+L+  F T             +R VD VSFDIR+GE L LVGESG GK+  +  +
Sbjct: 308 LVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTVSKIL 367

Query: 57  LRLLPYPLARHPSGSIRYE----GKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCI 112
           +R +         G+I ++      D+L+     L+ +R  +I M+FQ+P++SL+P   +
Sbjct: 368 MRAVT-----PDKGTITFDDGEGALDVLKLDGGELKALRA-KIQMVFQDPVSSLSPRMTV 421

Query: 113 EKQINEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMAL 172
           +  ++E L +H   T K        LL  VG+ +  + +   PH  SGGQRQR+ IA AL
Sbjct: 422 KNILSEPLEIHGRGTPKSREEHVRSLLQAVGLDQ--RFINRYPHSFSGGQRQRIGIARAL 479

Query: 173 ANEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQ 232
           A  P+LLI DEP +ALDV+VQ +IL LLK+LQ  +G+ +L ISH+L +V  +A R+ VM 
Sbjct: 480 ALVPQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMC 539

Query: 233 RGQIVEQAECATLFSSPQHHYTQMLINAEP 262
            G+IVE A    L  +P H YT+ L+ A P
Sbjct: 540 AGRIVELAPREVLMRNPVHPYTRSLLAAVP 569