Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  453 bits (1165), Expect = e-132
 Identities = 254/530 (47%), Positives = 346/530 (65%), Gaps = 18/530 (3%)

Query: 4   QNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYP 63
           ++L+EVR+L+VEF T   V   V  +S+ + KGETLA++GESGSGKSV++ +I+ L+  P
Sbjct: 3   EHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMP 62

Query: 64  LARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLH 123
             R  SG I  +G+DLL    +  + + G R+AMIFQ+P++ LNP++ +  QI+E +  H
Sbjct: 63  PGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH 122

Query: 124 KGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183
            GL G +A    L LL  VGIPEP + ++  PHE SGGQRQRVMIAMALA  P+LLIADE
Sbjct: 123 -GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADE 181

Query: 184 PTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECA 243
           PTTALDVTVQ ++L+LLKELQ   GMA+L+I+HDL +V  IA RV VM++G IVE     
Sbjct: 182 PTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVR 241

Query: 244 TLFSSPQHHYTQMLINAEPSGLPAHNPVGA---PLLEVDDLKVWFPIKKGFLQRTVDHVK 300
            ++ +PQH YTQ LI A P     H P GA   PLL V D++           +T    +
Sbjct: 242 EIYKNPQHPYTQKLIAAAPGKGAMHEP-GARAEPLLSVRDVR-----------KTYGSFE 289

Query: 301 AVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIR-FHGQNLEGLNQKAVRP 359
           A+ G++F L  G+T+ +VGESGSGKSTL  A+LRL     G   + G++L  L+   +  
Sbjct: 290 ALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYK 349

Query: 360 LRREMQVVFQDPFGSLSPRMCVADIVGEGLRIH-RIGTAQEQEAAIIAALEEVGLDPRTR 418
           LRR++Q+VFQDP  SL+PRM V  ++ E   IH  I    +    +   L +VGL     
Sbjct: 350 LRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHM 409

Query: 419 HRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTY 478
            RYPH+FSGGQRQRIAIARAL L+P LI+ DE  SALD +VQ QV+ELL  L+++  + +
Sbjct: 410 SRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAF 469

Query: 479 LFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAA 528
           +FI+HDL VV+  +  +MV++ G VVE G  + +F  P+  YTR LL A+
Sbjct: 470 IFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519



 Score =  177 bits (449), Expect = 9e-49
 Identities = 106/262 (40%), Positives = 159/262 (60%), Gaps = 13/262 (4%)

Query: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65
           L+ VRD+   + + + +     G+SFD+  GET+A+VGESGSGKS  A ++LRL      
Sbjct: 275 LLSVRDVRKTYGSFEALK----GISFDLMPGETMAVVGESGSGKSTLARALLRL-----D 325

Query: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125
              SG+  ++G+DL   S   L ++R + + M+FQ+P  SLNP   + + I+E  ++H  
Sbjct: 326 EPDSGTALWKGRDLFALSPAELYKLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVIHPD 384

Query: 126 LTGKEA-TARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
           +  K     R  ELL  VG+    + +   PH+ SGGQRQR+ IA ALA EP+L+I DE 
Sbjct: 385 ILPKAKWRERVAELLVQVGLSA--EHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEA 442

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
            +ALDV+VQ +++ELL  L+  MG+A + I+HDL +VR  A  V VMQ+G++VE      
Sbjct: 443 VSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVRE 502

Query: 245 LFSSPQHHYTQMLINAEPSGLP 266
           +F +P+  YT+ L+ A  S  P
Sbjct: 503 VFDTPRQAYTRALLAASLSPDP 524