Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 607 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  360 bits (924), Expect = e-104
 Identities = 230/599 (38%), Positives = 334/599 (55%), Gaps = 73/599 (12%)

Query: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60
           M+ Q L++VRDL VEFVT   + + V  V   + KGETLA+VGESGSGKSVT+++++R+L
Sbjct: 1   MTTQPLLDVRDLTVEFVTRRGIVKAVQHVDISVGKGETLAIVGESGSGKSVTSYAVMRIL 60

Query: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120
                R   GS+ + G DL   SE  ++ +RG  I+MIFQ P  +LNP+  +  QI ++L
Sbjct: 61  DRA-GRIAEGSVMFGGMDLKAASEHEMRDLRGREISMIFQNPRAALNPIRKVGDQIEDVL 119

Query: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180
             H   T  +   + +  L+ V I  PR+R  A P +LSGG  QRV+IA+ALA  P+LLI
Sbjct: 120 RQHVQSTSADRGEKAIAALEAVKIARPRERYHAYPFQLSGGMCQRVVIALALACNPQLLI 179

Query: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240
           ADEPTT LDVT Q  +++L+ EL    G++ +LI+HDL L      RV VM++G++VE A
Sbjct: 180 ADEPTTGLDVTTQKAVMDLIVELTKSRGLSTILITHDLGLAAAYCDRVVVMEKGRVVETA 239

Query: 241 ECATLFSSPQHHYTQMLINAEP------------------------SGL-PAHNP----- 270
             A +F++PQH YT+ L+ A P                        +GL PA +P     
Sbjct: 240 SAADIFANPQHPYTKKLMRATPRLGVGLRELLPEGDGGAAQRESVIAGLDPAIHPTSGEA 299

Query: 271 ----------------------------VGAPLLEVDDLKVWFPIK--KGFLQRTVDHVK 300
                                         APLL V+ L   +P +     L R      
Sbjct: 300 SSKTMDPRVKPGGDDGASGSREDANASKTAAPLLLVEKLVKEYPRQGATATLSRLFSRGP 359

Query: 301 AVDGVNFSLPQGQTLGI-VGES-------GSGKSTLGLAILRLI-SSQGGIRFHGQNLEG 351
           A +   F    G +  I  GES       G GKST  + ++RL+  + G I F G+ +  
Sbjct: 360 APEPEVFRAVDGISFQIGHGESVGLVGESGCGKSTTSMMLMRLLDQTSGRIVFDGEEIGT 419

Query: 352 -LNQKAVR-PLRREMQVVFQDPFGSLSPRMCVADIVGEG-LRIHRIGTAQEQEAAIIAAL 408
            L Q+  R PLR+ +Q+VFQDP  SL+PR   A  + +  L++  I       A      
Sbjct: 420 ILPQRFARLPLRKSIQMVFQDPTDSLNPRFTAARAIADPILQLGEIKGRDAVRARCEELA 479

Query: 409 EEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLR 468
           E+VGL      R+PH+ SGGQ+ R+ IARA+ L+P L++LDEPT+ALD +VQ  V+ LL+
Sbjct: 480 EQVGLPLDLLDRFPHQLSGGQKARVGIARAIALRPKLVILDEPTAALDVSVQAVVLNLLQ 539

Query: 469 NLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           +L+Q   ++YLF+SHDL VV+ L  +++V++ G +VEQG ++ +  +P+H YTR+LL A
Sbjct: 540 DLKQTLGMSYLFVSHDLNVVRLLCDRVIVMRSGRIVEQGSSEQVLGSPKHDYTRELLTA 598



 Score =  179 bits (454), Expect = 3e-49
 Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 9/244 (3%)

Query: 21  QVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLL 80
           +V R VDG+SF I  GE++ LVGESG GKS T+  ++RLL        SG I ++G+++ 
Sbjct: 364 EVFRAVDGISFQIGHGESVGLVGESGCGKSTTSMMLMRLLD-----QTSGRIVFDGEEIG 418

Query: 81  QQSEKTLQRIRGNR-IAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEAT-ARTLEL 138
               +   R+   + I M+FQ+P  SLNP     + I + +L    + G++A  AR  EL
Sbjct: 419 TILPQRFARLPLRKSIQMVFQDPTDSLNPRFTAARAIADPILQLGEIKGRDAVRARCEEL 478

Query: 139 LDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILE 198
            + VG+P     L   PH+LSGGQ+ RV IA A+A  P+L+I DEPT ALDV+VQ  +L 
Sbjct: 479 AEQVGLP--LDLLDRFPHQLSGGQKARVGIARAIALRPKLVILDEPTAALDVSVQAVVLN 536

Query: 199 LLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLI 258
           LL++L+  +GM+ L +SHDLN+VR +  RV VM+ G+IVEQ     +  SP+H YT+ L+
Sbjct: 537 LLQDLKQTLGMSYLFVSHDLNVVRLLCDRVIVMRSGRIVEQGSSEQVLGSPKHDYTRELL 596

Query: 259 NAEP 262
            A P
Sbjct: 597 TAIP 600