Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 592 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  481 bits (1238), Expect = e-140
 Identities = 263/514 (51%), Positives = 350/514 (68%), Gaps = 12/514 (2%)

Query: 25  VVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLLQQSE 84
           V+ GV   +R+GE  ALVG SGSGKS+TA ++L LLP P AR   G+IR+EG  L    E
Sbjct: 29  VLHGVGLTMRRGEIHALVGASGSGKSLTARAVLGLLP-PGARLTHGNIRFEGAQLAHAPE 87

Query: 85  KTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGI 144
             L+ +RG+RI M+FQ+P++SLNPLH IE+Q+ E L +HKG+ G  A AR LELLDMVG+
Sbjct: 88  SALRALRGDRIGMVFQDPLSSLNPLHTIERQVAEPLAIHKGIRGPRARARALELLDMVGL 147

Query: 145 PEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQ 204
            EP  RL + PH+LSGGQRQRV +AMALAN+P LLIADEPTTALD TVQ +IL L+  L+
Sbjct: 148 DEPEARLASYPHQLSGGQRQRVALAMALANDPALLIADEPTTALDTTVQSQILRLIDTLR 207

Query: 205 ARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLINAE--- 261
            R+GM +L++SHDL +VR +A  + VM  G IVE A    +FS+P    T+ L+ AE   
Sbjct: 208 HRLGMGVLIVSHDLGVVRSLADVIHVMDAGCIVESAPTTRIFSAPASPVTRALLGAEGPS 267

Query: 262 -PSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGE 320
            P+ LP        LLE  D+ V F  ++G          A+   +F+L +G+ LG+VGE
Sbjct: 268 GPAPLPETTATQPALLEARDMGVTFTRQRGLFGLRKTGHDALVSASFTLRRGECLGVVGE 327

Query: 321 SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMC 380
           SGSGKSTL LA+LRLI+S+G +   GQ L+ L+++A+RPLRR++Q VFQDPF +L+PRM 
Sbjct: 328 SGSGKSTLALAVLRLIASRGRVTLDGQRLDTLDEEALRPLRRKVQAVFQDPFSALNPRMT 387

Query: 381 VADIVGEGLRIH------RIGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIA 434
           VA+ + EGL  H      R G     +   +AAL+EVGL      RYP E SGGQ QR+ 
Sbjct: 388 VAESIAEGLTTHFPDLRGRQGLKAMHDKT-LAALDEVGLSDDFMQRYPGELSGGQCQRVV 446

Query: 435 IARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQ 494
           IARAL L+P +++LDEPTS+LDR +Q QVV LLR+LQ ++ +  LFI+HDL++V++  H+
Sbjct: 447 IARALALRPEVLVLDEPTSSLDRALQFQVVALLRDLQLRHGMACLFITHDLSLVRSFCHR 506

Query: 495 LMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAA 528
           +MV+  GHVVE G    +  AP    TR L+EAA
Sbjct: 507 VMVLHRGHVVEAGPTPVVLDAPATATTRALVEAA 540



 Score =  163 bits (413), Expect = 1e-44
 Identities = 105/274 (38%), Positives = 156/274 (56%), Gaps = 21/274 (7%)

Query: 6   LIEVRDLAVEFVTGDQV-------NRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILR 58
           L+E RD+ V F     +       +  +   SF +R+GE L +VGESGSGKS  A ++LR
Sbjct: 282 LLEARDMGVTFTRQRGLFGLRKTGHDALVSASFTLRRGECLGVVGESGSGKSTLALAVLR 341

Query: 59  LLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINE 118
           L+         G +  +G+ L    E+ L+ +R  ++  +FQ+P ++LNP   + + I E
Sbjct: 342 LIA------SRGRVTLDGQRLDTLDEEALRPLR-RKVQAVFQDPFSALNPRMTVAESIAE 394

Query: 119 ILLLH----KGLTGKEATA-RTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALA 173
            L  H    +G  G +A   +TL  LD VG+ +    ++  P ELSGGQ QRV+IA ALA
Sbjct: 395 GLTTHFPDLRGRQGLKAMHDKTLAALDEVGLSDDF--MQRYPGELSGGQCQRVVIARALA 452

Query: 174 NEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQR 233
             PE+L+ DEPT++LD  +Q +++ LL++LQ R GMA L I+HDL+LVR   HRV V+ R
Sbjct: 453 LRPEVLVLDEPTSSLDRALQFQVVALLRDLQLRHGMACLFITHDLSLVRSFCHRVMVLHR 512

Query: 234 GQIVEQAECATLFSSPQHHYTQMLINAEPSGLPA 267
           G +VE      +  +P    T+ L+ A     PA
Sbjct: 513 GHVVEAGPTPVVLDAPATATTRALVEAALGCAPA 546