Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  134 bits (336), Expect = 4e-36
 Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 1/223 (0%)

Query: 117 PSADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAG 176
           PS  +W GTD+ GRDV AR++YG RI++   L +TV    +G++ G + G++GGWVD   
Sbjct: 75  PSGVHWFGTDEYGRDVFARLVYGSRITLYIVLLVTVIVGPIGLLVGTVSGYFGGWVDSLF 134

Query: 177 QRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVR 236
            R  +I+   P L L +   + + P     +  + L +W  +  + RAE L  RN ++V 
Sbjct: 135 MRITDIFISFPSLVLALAFIAALGPGLEHAVIAIALTAWPPIARLARAETLPLRNADFVV 194

Query: 237 AARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGEL 296
           A +  G  +  I+ RHI+P  + S +  +   +   I T  AL FLG G  A  P  G +
Sbjct: 195 AVQLQGASSTRIILRHIIPMCLSSVIIRLTMNMASIILTAAALGFLGLGAQAPLPEWGAM 254

Query: 297 VAQGKSNLQAPWLGISAFAVLALMLSLLV-FIGESARDAFDPR 338
           ++ G+  +   W  ++A     +++SL    +G+  RD  DPR
Sbjct: 255 ISTGRRYMLESWWLVAAPGAAIMLVSLAFNLLGDGLRDVLDPR 297