Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

 Score =  131 bits (330), Expect = 2e-35
 Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 1/225 (0%)

Query: 115 APPSADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDL 174
           A PSA++W GTD  GRD+  R + G RIS++  +   + + ++G + GA  GF GG  D 
Sbjct: 74  AGPSAEHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDR 133

Query: 175 AGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEY 234
              R LEI   +P ++L+I+L +F   N   +   +   +W+ +  +VR + L  R+ E+
Sbjct: 134 VMMRILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEF 193

Query: 235 VRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLG 294
           + AA   G+    I+ RHI+PN +     +   ++   I T + L FLG G+     S G
Sbjct: 194 IEAAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWG 253

Query: 295 ELVAQGKSNLQ-APWLGISAFAVLALMLSLLVFIGESARDAFDPR 338
            L+ +G + ++ A W  +   A + L L    ++G+  RDA DP+
Sbjct: 254 ALLQEGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298