Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 351 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like from Synechococcus elongatus PCC 7942

 Score =  135 bits (339), Expect = 2e-36
 Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 31/354 (8%)

Query: 12  ERFKANRRGW--WSLWLFLILFGLSLGAELIANDKPIAVRYD---------------GQW 54
           ER     R W  W + L L+L+  +LGA+ +A   P + + D               GQW
Sbjct: 3   ERRSPLPRSWTSWGVGLLLLLYLGALGADCLAPYNPYSSQADAALLPPSQIFWRNRQGQW 62

Query: 55  YFPAFKRYPETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAP 114
             P    YP     G   LE   +   I +  A     +     P+   S   D  +   
Sbjct: 63  LGPHV--YPVRQ--GPIDLETGQRE-VITDWNAPSPLRIWVVGDPYRVLSWKGDRHLLGT 117

Query: 115 APPSADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDL 174
             P   + LGTDDQGRD  +R++YG RIS+   L   + +  +G++ G + G++GGWVD 
Sbjct: 118 TGPGKLHLLGTDDQGRDQFSRLLYGSRISLSVGLVGVILTFPLGILVGGIAGYWGGWVDA 177

Query: 175 AGQRFLEIWSGLPVLYLLIILASFVQP------NFWWLLGIMLLFSWMSLVDVVRAEFLR 228
              R +E+   +P LYLL+ LA+ + P       F  ++ I  L +W  L  V+R + L 
Sbjct: 178 LIMRLVEVLMTIPSLYLLVALAAVLPPGLSSAERFLLIVAITSLINWAGLARVIRGQVLS 237

Query: 229 GRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPA 288
            R  EYV+A++ +G     ++ RHILP  +   +      +   I   + L  +G G+  
Sbjct: 238 LREREYVQASQVMGASRLYLLIRHILPQTLTYVIIAATLAVPSFIVAESVLSLVGLGIQQ 297

Query: 289 GSPSLG---ELVAQGKSNLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPRK 339
             PS G    L       L  PWL      ++ + +     +G+  RD  DPR+
Sbjct: 298 PDPSWGNMLSLATNASMLLLNPWLIWPPALLIVVAVLAFNVVGDGLRDRLDPRR 351