Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 346 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  450 bits (1158), Expect = e-131
 Identities = 214/339 (63%), Positives = 266/339 (78%), Gaps = 1/339 (0%)

Query: 1   MALSPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFK 60
           + L+PL RRR   F+ NRRG+ SLW+FL LF +SLGAEL+ANDKP+ + Y G  YFP  K
Sbjct: 5   LTLTPLTRRRLAAFRRNRRGFHSLWIFLTLFIISLGAELVANDKPLVLSYKGDLYFPVLK 64

Query: 61  RYPETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSAD 120
            YPETTFGG FP  A+Y+ PY+ E +A  D + +W P+ F+Y ++N  L  P P+ P+ D
Sbjct: 65  DYPETTFGGFFPTTADYRDPYVAEAIAN-DGWTVWPPVRFAYDTVNRTLDRPVPSAPTWD 123

Query: 121 NWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFL 180
           N LGTDDQGRDV AR++YGFR+SVLF L LT  SS++GV AGA+QG++GGW+DL  QR L
Sbjct: 124 NPLGTDDQGRDVFARLLYGFRLSVLFGLALTALSSLIGVAAGAVQGYFGGWIDLLAQRVL 183

Query: 181 EIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARA 240
           EIW GLP L++LII+AS +QP FW LL I+LLFSW +LV VVRAEFLRGRN +YVRAA+A
Sbjct: 184 EIWGGLPQLFVLIIVASVIQPGFWTLLLILLLFSWTALVGVVRAEFLRGRNFDYVRAAKA 243

Query: 241 LGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQG 300
           LGM +  IM +H+LPNAM++T+TF PFIL+G++  LTALDFLG G+P GSPSLGEL+  G
Sbjct: 244 LGMSDTKIMIKHVLPNAMVATLTFAPFILSGSVTALTALDFLGLGMPPGSPSLGELLRVG 303

Query: 301 KSNLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPRK 339
           K NLQAPWLG + F VLA ML+LLVFIGE+ RDAFDPRK
Sbjct: 304 KENLQAPWLGFTGFIVLAAMLTLLVFIGEAVRDAFDPRK 342