Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 276 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (331), Expect = 1e-35
 Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 4/219 (1%)

Query: 122 WLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLE 181
           WLGTD+ GRD+ A++ +G R+S++  +  T  +  +GV+ GAL G+YGG VD A  R  +
Sbjct: 56  WLGTDNSGRDIAAQIFHGARLSLVIGVVATSIAIALGVLVGALAGYYGGLVDDALMRITD 115

Query: 182 IWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARAL 241
            +  LP   LL++L +        ++  + + SW +   + RAEFL  R  E+V+AAR  
Sbjct: 116 AFQTLPNFLLLLLLIAVFGSRIETVVIAIGIVSWPAPARLTRAEFLSLRGREFVQAARLA 175

Query: 242 GMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGK 301
           G+R+  +++R ILPNA+   + +   ++  AI   +AL FL    P  S S G L+ QG+
Sbjct: 176 GLRDLRLIFREILPNALPPIIVYASVVMATAILLESALAFLNLSDPNVS-SWGNLIGQGR 234

Query: 302 SNLQAPWLGISAFAVLALMLSLLV--FIGESARDAFDPR 338
             L++ W  +SA    A++L++L    +G+   DA +PR
Sbjct: 235 GVLRSEWY-VSAIPGFAILLTVLAVSLVGQGLNDALNPR 272