Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 302 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  139 bits (349), Expect = 1e-37
 Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 3/226 (1%)

Query: 116 PPSADN--WLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVD 173
           PP   N  W GTD  GRD+  R +YG R+S+   +  T  S ++GV+ GA+ G++GG VD
Sbjct: 75  PPDFANGFWFGTDGNGRDLFVRTLYGARVSLAVGVIATTVSLVIGVVYGAIAGYFGGRVD 134

Query: 174 LAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLE 233
           +   RF+++   LP ++ +I+L      N + +   +    W+++  +VR + +     E
Sbjct: 135 MLMMRFVDVLYSLPFMFFVIMLMVVFGRNIFLIFVALGAVEWLTMARIVRGQTMAVTRKE 194

Query: 234 YVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSL 293
           ++ AA A+G+ +  I+ RH++PN +   + +    +   + T + L FLG G+     S 
Sbjct: 195 FIEAAHAIGVSDATIIRRHVIPNILGPVIVYATLTIPQVVLTESFLSFLGLGVQEPLTSW 254

Query: 294 GELVAQGKSNLQ-APWLGISAFAVLALMLSLLVFIGESARDAFDPR 338
           G L+++G   L+ +PW+ +     LAL L    FIG+  RDA DP+
Sbjct: 255 GVLISEGARVLEVSPWMLLFPAFFLALTLLCFNFIGDGLRDALDPK 300