Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 619 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  501 bits (1289), Expect = e-146
 Identities = 273/605 (45%), Positives = 378/605 (62%), Gaps = 21/605 (3%)

Query: 10  LAGSLLLACLSL--PALAAPQ-----HALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQ 62
           LA SLL A L L  PA  A +     HA +   EP KY   F  FDYVNPDAPKGG  R 
Sbjct: 12  LAASLLTAALLLLPPASNAEEQPVWHHATSSIGEP-KYKDGFARFDYVNPDAPKGGELRL 70

Query: 63  SSFGGFDSLNPFINKGVAAENIG-IIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRF 121
           S  G FDS NP + KG  A  +  ++++TL++ ++DE  T YGL+A  I    D S   F
Sbjct: 71  SESGTFDSFNPILAKGEVATGVSSLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATF 130

Query: 122 YLRPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKN 181
            LR EA++ DG P+  +DVVF+F+ ++K+  PL+  YY  V          V F+F  KN
Sbjct: 131 RLRAEAKWADGKPVTPEDVVFSFD-MVKEHNPLFSNYYRHVISAEKTGERDVTFRFDEKN 189

Query: 182 NRELPLILGQLPVLPKHWYEN-------REFNRGNLEIPLGSGPYKVAKVKAGRSVRYER 234
           N ELP ILGQ P+LPKHW+E        R+ +R  LE  +GSGPYK+A  +AG S+R+E 
Sbjct: 190 NHELPNILGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKIASFQAGGSIRFEL 249

Query: 235 VKDYWAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPA 294
             DYW KDL +N G YNF  + +  + D +V  EA +AG  D+  + SA +WATAY+ PA
Sbjct: 250 RDDYWGKDLNVNVGRYNFRTINYAFFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPA 309

Query: 295 VREGRLIKEELPNG-NPTG-MQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAY 352
           +++GR+I+EE+ N    TG MQ F+ N+RR  F+D RVRQAL+   D+E  N+ L + A+
Sbjct: 310 MKDGRVIREEIENPLRATGIMQAFVPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAF 369

Query: 353 TRTGSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQA 412
            R  SYF  +E+A+ GLP   E +ILE L+ KVP  VFT  + NPV+     +R+  R+A
Sbjct: 370 QRVDSYFWGTELASSGLPEGREKEILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKA 429

Query: 413 YKLLQEAGWKIVDDKMVDAQ-GKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVD 471
             L +EAG+++   ++V+A+ G+P S E LL+   FER + PF  ++  +GI+  IR VD
Sbjct: 430 LALFKEAGYELKGSRLVNAKTGEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVD 489

Query: 472 VSQYITRLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVD 531
            SQY  R+RS DYDMI G + Q+  PGNEQ ++W SA+ + PGSRN+ G+ DPAID+L+ 
Sbjct: 490 DSQYTNRVRSYDYDMIYGIWAQTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIR 549

Query: 532 QLINADSRQSLIDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGI-D 590
           +++ A +R+ L+   RALDRVLL  +YV+P ++ K  RVAYWNH+  P   P Y +   D
Sbjct: 550 RIVFAPNREELVATTRALDRVLLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMDFPD 609

Query: 591 TWWIK 595
            WW K
Sbjct: 610 AWWSK 614