Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 604 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  479 bits (1234), Expect = e-139
 Identities = 253/591 (42%), Positives = 355/591 (60%), Gaps = 12/591 (2%)

Query: 14  LLLACLSLP--ALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSSFGGFDSL 71
           +LLA  S    ALAAP HA+ ++ +P   PADFKHF YVNP   KGG       G FDSL
Sbjct: 10  MLLAASSFATGALAAPVHAIAMHGDPA-LPADFKHFPYVNPQVKKGGKIAYGVVGTFDSL 68

Query: 72  NPFINKGVAAENIG--------IIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYL 123
           NPFI K +     G        ++Y++LM++SQDEPFT YGL+A  +E   D ++++F L
Sbjct: 69  NPFILKSMRTTARGMWDPGFGNLVYESLMQRSQDEPFTMYGLLAETVEWDDDRTFIQFNL 128

Query: 124 RPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNR 183
            P+AR+ DG P+ A+DV+FTF  L   G   +    + VA++       V F F  + +R
Sbjct: 129 NPKARWADGRPVTAEDVIFTFELLRDKGRAPFSNRLSKVAKMEKVGERSVRFTFTEEADR 188

Query: 184 ELPLILGQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDL 243
           E+PL+LG  PVLPKH      F+R +LE PLGSGPY+VA+V+ G  + Y R  DYWAKDL
Sbjct: 189 EIPLLLGLSPVLPKHAINVETFDRTSLEPPLGSGPYRVAEVRPGERIVYRRNPDYWAKDL 248

Query: 244 PINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKE 303
           P   G  N+D ++ + +       EA K G  D   E SA  WA AY+ PAVR G +IKE
Sbjct: 249 PSKVGLDNYDEISVEYFLQENTLFEAFKKGVVDIYAEGSATKWARAYDFPAVRSGNVIKE 308

Query: 304 ELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSE 363
                 P+GM GF+FN RRP+F ++++RQ L+L+ D+EW NK LF+GAYTRT SY++NS 
Sbjct: 309 TFKPKTPSGMLGFVFNTRRPMFDNIKLRQGLALVFDFEWVNKNLFDGAYTRTQSYWQNSS 368

Query: 364 MAARGLPSPN-ELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWK 422
           ++  G+ + N EL ++  +R ++   +    +  PV+DGSG  R   R+A  LL+EAG+ 
Sbjct: 369 LSFLGVAADNRELDLMGDVRERINPAILDGSYRLPVTDGSGRDRNVLREAVTLLREAGYS 428

Query: 423 IVDDKMVDAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSR 482
           I D KMVDA+G P + E +      E++ L ++R LA LGI   +R VD SQY  R +S 
Sbjct: 429 IKDGKMVDAKGTPLAFEIMSQNAGQEKVALAYQRFLAPLGIAARVRTVDDSQYQLRSQSF 488

Query: 483 DYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSL 542
           DYD+I+  +P S SPG EQ   WSS   D  GS NF G+ D  +D+L++ ++ A + +  
Sbjct: 489 DYDVIIKSFPSSLSPGLEQINRWSSQTRDRQGSDNFAGVADKDVDKLINNILQARNPEDF 548

Query: 543 IDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWW 593
               RA DR+L+   Y++P +H+    +A W HIG P   P Y   + +WW
Sbjct: 549 TAAVRAHDRLLVNNSYLVPLYHLDAQWIARWKHIGRPTTVPLYGYQLPSWW 599