Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 105/453 (23%), Positives = 171/453 (37%), Gaps = 74/453 (16%)

Query: 95  SQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPMRADDVVFTFNALIKDGAPL 154
           S D+ F    L+A +   + D     F LR + R+HDG    A+ V F+  AL K+  P 
Sbjct: 82  SYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILAL-KENHPR 140

Query: 155 YRQYYADVAEVVAEEPLKVLFKFKHKNNRELPLILG-------------QLPVLPKHWYE 201
            R  +A V E        VL      N+ E+ L L              + P++PKH YE
Sbjct: 141 GRATFAHVKEA------NVL------NSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYE 188

Query: 202 NREFNRGNLEI-PLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGFYNFDAMTFDAY 260
             +       + P+G+GPYK  +   G    + R +DYW    P        D + F   
Sbjct: 189 GTKIAENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPY------LDQIIFRFI 242

Query: 261 RDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGNPTGMQGFIFNI 320
            D   A+ A++ G     ++VS  N              L+ +  P      +    FN+
Sbjct: 243 VDPAAAVAAIETGE----VQVSTANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNL 298

Query: 321 RRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARGLPSPNELKILEP 380
                 D++VR A++  +D ++    ++ G  TR             G  SP+  K   P
Sbjct: 299 ENKYLADIKVRHAIAHAVDKDFIVNTVYLGYATRLD-----------GPVSPDLAKFYSP 347

Query: 381 LRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMVDAQGKPASIEF 440
               +P+  F       + D +G  R      +KL  +              G P     
Sbjct: 348 ---DLPKYEFDPAKSEKLLDEAGYARGADGFRFKLFIDP---------TQPSGPPKQTAE 395

Query: 441 LLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRL-RSRDYDMIVGGYPQSNSPG- 498
            +AQ             LA +GI++ +R  D + ++ R+   RD+D+ + G      P  
Sbjct: 396 YIAQA------------LAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLYDPTV 443

Query: 499 NEQREFWSSAAADNPGSRNFIGLRDPAIDQLVD 531
             QR +WS          N     +P +D+L++
Sbjct: 444 GVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLE 476