Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  606 bits (1562), Expect = e-177
 Identities = 308/600 (51%), Positives = 398/600 (66%), Gaps = 14/600 (2%)

Query: 7   LRRLAGSLLLACLSLP-----------ALAAPQHALTLYDEPPKYPADFKHFDYVNPDAP 55
           +R +A   L A L+LP           A + P HAL+LY +  KYPADF HFDYVNP+AP
Sbjct: 1   MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDI-KYPADFTHFDYVNPEAP 59

Query: 56  KGGTFRQSSFGGFDSLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPD 115
           KGG  R S+FG FD+LNP+  KG AA  IG+   TL   S DEP TEYGLVA  +E A D
Sbjct: 60  KGGAIRLSAFGTFDTLNPYTVKGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAAD 119

Query: 116 NSWVRFYLRPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLF 175
            SW+ F LRPEAR+ DG P+ A+DV F+F  L   G PLY  YY++V  V   +  +V F
Sbjct: 120 RSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKF 179

Query: 176 KFKHKNNRELPLILGQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERV 235
            F    NRELP I+GQLPVLPKH++  R+F    L+ P+ +GPY++A  + GR + YERV
Sbjct: 180 TFSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERV 239

Query: 236 KDYWAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAV 295
           KDYWA+ LP+++G  NFD + +D YRD TV LE  KAGAFD+  E SAKNWAT Y  PAV
Sbjct: 240 KDYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAV 299

Query: 296 REGRLIKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRT 355
            EG +I E++P   P   QGFIFN+RR  FQD RVR+AL+   D+EWTN+ LF G YTRT
Sbjct: 300 SEGHVITEKVPVKGPDREQGFIFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRT 359

Query: 356 GSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSD-GSGMIREQQRQAYK 414
            S+FENSE+AA GLP P ELKILEPLR ++P +VFTE +  PV+D   G +R   ++A  
Sbjct: 360 RSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALD 419

Query: 415 LLQEAGWKI-VDDKMVDAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVS 473
           L++EAGW +    KMV+A G+P + E LL Q + ER++LP  +N   LGI   +R VD  
Sbjct: 420 LMKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTP 479

Query: 474 QYITRLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQL 533
           Q+I+R++S D+DM+   + QSNSPGNEQR+ WSS AAD PG+ N  GL+ PA+D L++ +
Sbjct: 480 QFISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESV 539

Query: 534 INADSRQSLIDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWW 593
           I A +R  LI   RALDRVL W +  IP+++    R+AYWN  G P V+P   +    WW
Sbjct: 540 IAAPTRADLIARTRALDRVLQWSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWW 599