Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 626 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  467 bits (1202), Expect = e-136
 Identities = 247/579 (42%), Positives = 345/579 (59%), Gaps = 6/579 (1%)

Query: 22  PALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSSFGGFDSLNPFINKGVAA 81
           PA     HA+ ++ +P + PADF    YVNPDAPKGG    S  G FDSLNP I KG+A 
Sbjct: 42  PAPGIVSHAIAMHGKPAQ-PADFTAMPYVNPDAPKGGRMIASVVGAFDSLNPLIVKGIAV 100

Query: 82  ENI-GIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPMRADDV 140
           + + G + ++L+ +  DEPFT YGL+A  +E     S+V F + P ARF DG P+ A+DV
Sbjct: 101 QQMRGYVIESLLARGHDEPFTLYGLLARSVETDDVRSYVTFRIDPRARFSDGKPVTAEDV 160

Query: 141 VFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRELPLILGQLPVLPKHWY 200
           +F++  L   G P  R YY  VA   A +PL V F F    +RELPLILG +PVLP+H  
Sbjct: 161 LFSWKLLRDKGRPNLRLYYGKVASAEALDPLTVRFDFGGAPDRELPLILGLMPVLPRHAV 220

Query: 201 ENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGFYNFDAMTFDAY 260
           +   F   +L+ PLGSGPY V+ V+AG SV   R  +YW +DLPINRG +NFD M  D +
Sbjct: 221 DPDSFEETSLKPPLGSGPYHVSHVQAGTSVTLTRDPNYWGRDLPINRGLWNFDEMRIDYF 280

Query: 261 RDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGNPTGMQGFIFNI 320
           R++    EA K G +D+ +E     W+  Y+ PA R G +I++ +  G P      +FN 
Sbjct: 281 RESNAQFEAFKRGLYDFRVETDPLRWSEGYDFPAARRGDVIRDAIKPGTPEPTDTLVFNT 340

Query: 321 RRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARG-LPSPNELKILE 379
           RRPVF DVRVR+AL  L D+EW N+  F G YTRT  +F  SE++A G      E K+L+
Sbjct: 341 RRPVFADVRVREALLNLFDFEWINRNYFFGLYTRTAGFFGGSELSAYGRAADEGERKLLQ 400

Query: 380 PLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMVDAQG--KPAS 437
           P   ++   +    F  P SDGSG  R   R+A  LL++AG+++ D  ++  +   +P +
Sbjct: 401 PYLPRLRADILDGSFRLPESDGSGRDRAGLRRALDLLEQAGYQL-DGTVLRKRDTRQPLT 459

Query: 438 IEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVGGYPQSNSP 497
            E L+   E ERI L F R+L   GI +++R VD  Q+  R  + D+DMI   + QS SP
Sbjct: 460 FELLVTTREQERIALAFARDLKRAGITVSVRTVDAVQFDQRRLAYDFDMIPNRWDQSLSP 519

Query: 498 GNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSLIDHCRALDRVLLWGY 557
           GNEQ  +W S AAD PG+RN++G +DPAID ++  L+ A  R   +D  RALDRVL+ G+
Sbjct: 520 GNEQSFYWGSDAADTPGTRNYMGAKDPAIDAMIAALLRARGRTDFVDAVRALDRVLISGF 579

Query: 558 YVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWWIKP 596
           YV+P + ++   +A WN +  P  +       +TWW +P
Sbjct: 580 YVVPVYSVREQWIARWNRLERPKATALTGYLPETWWYRP 618