Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 538 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score = 98.2 bits (243), Expect = 8e-25
 Identities = 117/487 (24%), Positives = 195/487 (40%), Gaps = 62/487 (12%)

Query: 56  KGGTFRQSSFGGFDSLNPFINKGVAAENIG-IIYDTLMRQSQDEPFTEYGLVAGKIEKAP 114
           KGG F          LNP +        IG  I + L+    D      G++A   E  P
Sbjct: 38  KGGAFNVHYGAEQRQLNPSLQASTGVYIIGGKIQEPLV--DLDTAGNPVGVLAESWESTP 95

Query: 115 DNSWVRFYLRPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVL 174
           D   + F LR    +HDG P  ++DV FT   + K            +  V   +P   +
Sbjct: 96  DGKTITFKLRKGVTWHDGKPFTSEDVAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAI 155

Query: 175 FKFKHKNNRELPLILGQLP----VLPKHWYENREF--NRGNLEIPLGSGPYKVAKVKAGR 228
           F+++      L L+L  LP    V  KH YEN +   N  NL  P+G+GP+K  K + G+
Sbjct: 156 FRYERP--MPLNLLLRALPDLGYVSAKHIYENGDIRQNPANL-APIGTGPFKFNKYERGQ 212

Query: 229 SVRYERVKDYWAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWAT 288
            +  +R  +YW  + P        D + +    D   A   L+AG    GL++S  +  T
Sbjct: 213 YIIADRNDNYWRPNAPY------LDRIVWKVITDRAAAAAQLEAG----GLQLSPFSGLT 262

Query: 289 AYNVPAV-REGRLIKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQL 347
             ++  + ++ R I     N          FN RR    D+RVR+A++  ++  +  +  
Sbjct: 263 ISDMARLGKDKRFIVSTKGNEGNARTNTIEFNFRRKELSDIRVRRAIAHAINVPFFIEN- 321

Query: 348 FNGAYTRTGSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIRE 407
           F G + + G+                         G +P    T+ +  P    +     
Sbjct: 322 FLGDFAKLGT-------------------------GPIP-STSTDFYPGP---NTPQYPY 352

Query: 408 QQRQAYKLLQEAGWKIVDDKMVDAQGKPASIEFLLAQTEFERILLP--FKRNLADLGIEL 465
            +++A  LL EAG K        A G   S+  L A    +  L     +++L ++GI++
Sbjct: 353 DKQKAIALLDEAGLK------PGAGGNRLSLRLLPAPWGEDISLWATFIQQSLGEVGIQV 406

Query: 466 NIRRVDVSQYITRLRSRD-YDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDP 524
            + R D   ++ ++     +D+  G +   N P      ++ S         N  G  DP
Sbjct: 407 EVVRNDGGGFLKQVYDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDP 466

Query: 525 AIDQLVD 531
           AID+++D
Sbjct: 467 AIDKIID 473