Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 613 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  437 bits (1124), Expect = e-127
 Identities = 247/614 (40%), Positives = 343/614 (55%), Gaps = 20/614 (3%)

Query: 10  LAGSLLLACLSLPALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTF---RQSSFG 66
           + G L +A L +   A   +A+  Y EP KY ADFKHFDYVNP+APKGGT      S   
Sbjct: 2   MCGVLAVAGLLVAPRAHAVYAIAQYGEP-KYLADFKHFDYVNPNAPKGGTLVLANPSRLT 60

Query: 67  GFDSLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPE 126
            FD  NPF  +G  A  + +++++L   S DE  + YGL+A  I  APD   V F++ P 
Sbjct: 61  SFDKFNPFTLRGNTAPGVDLMFESLTVGSSDEVASAYGLLADDISIAPDGLSVTFHINPL 120

Query: 127 ARFHDGHPMRADDVVFTFNALIK-DGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNREL 185
           ARF +G P+ ADDV F+ + L     AP +   + ++   V  +P  + F+F H+ NREL
Sbjct: 121 ARFSNGDPVTADDVKFSLDTLKSPQAAPQFASIFGEITRAVVVDPHTIRFEF-HQRNREL 179

Query: 186 PLILGQLPVLPKHWYENRE-----FNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWA 240
           PL+ G +PV  + W    +     F++   E P+GSGPY + +   GR++ Y R  +YW 
Sbjct: 180 PLLAGGIPVFSRKWGMKPDGSRIAFDQLAFEKPIGSGPYLIEQYDNGRTITYRRDPNYWG 239

Query: 241 KDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRL 300
             LP+  G  NFD + +  Y D T  LEA KAG +D  +E  A+NW           G L
Sbjct: 240 AALPVRVGMNNFDRIVYKLYSDNTARLEAFKAGEYDALVEYVARNWVRRDVGKKFDSGEL 299

Query: 301 IKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFE 360
           IK+  P  N TGMQGF+ N RR +FQDVRVR+AL L LD++W N+QLF   YTR  S+F 
Sbjct: 300 IKQVFPQHNGTGMQGFMLNTRRSLFQDVRVRKALDLALDFQWLNRQLFFNQYTRIDSFFA 359

Query: 361 NSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAG 420
           N+++ A+GLPSP EL +LEP R K+   VF      P +D  G +R    +A  LLQ+AG
Sbjct: 360 NTDLQAKGLPSPGELALLEPWRAKLDPAVFGPPPKQPDTDPPGSLRANLLEARALLQQAG 419

Query: 421 WKIVDDKMVDAQGKPASIEFL---LAQTEFERILLPFKRNLADLGIELNIRRVDVSQYIT 477
           W   D  + +A+G+P   E L    +  + E I+  F RNL  LGI+   R  D + Y  
Sbjct: 420 WTYRDGALRNAKGEPFRFEILDDSGSSAQMEPIVATFIRNLQKLGIQATFRVSDFAVYQK 479

Query: 478 RLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINAD 537
           RL + D+D      P    PG+EQ E + S AAD  GS N IGL+ P +D +++ L++A 
Sbjct: 480 RLDAFDFDTTTIRMPDVQVPGSEQIERFGSKAADTQGSDNMIGLKSPVVDAILNALVHAQ 539

Query: 538 SRQSLIDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIG----IDTWW 593
           +R+ L+D   ALDRVL+ GYYV+P+W+  T RVA+   +  P   P Y          WW
Sbjct: 540 TREQLVDATHALDRVLMHGYYVVPHWYSATHRVAFKRGLAWPKTLPLYYSAEGWITSMWW 599

Query: 594 IKPDVTPAVSEAPA 607
                 P+ S+ PA
Sbjct: 600 FAQ--PPSQSQPPA 611